PXD001259

PXD001259 is an original dataset announced via ProteomeXchange.

Title	Stadard peptide mixture plus HeLa
Description	To test our peak detection and label-free quantitation algorithm, practical applications of AB3D for LC-MS data sets were evaluated using a standard peptide mixture consisting of bovine serum albumin (BSA) peptides with different concentrations, peptides derived from four standard proteins (data set 1), and complex peptide samples derived from HeLa cells and BSA (data set 2).
HostingRepository	PRIDE
AnnounceDate	2014-12-04
AnnouncementXML	Submission_2014-12-04_02:09:00.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ken Aoshima
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Bos taurus (Bovine); NCBI TaxID: 9913;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2014-08-26 01:12:43	ID requested
⏵ 1	2014-12-04 02:09:01	announced

Aoshima K, Takahashi K, Ikawa M, Kimura T, Fukuda M, Tanaka S, Parry HE, Fujita Y, Yoshizawa AC, Utsunomiya S, Kajihara S, Tanaka K, Oda Y, A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry. BMC Bioinformatics, 15(1):376(2014) [pubmed]

curator keyword: Technical

submitter keyword: peptide mixture, LC-MS

Ken Aoshima
contact affiliation	Eisai Co., Ltd.
contact email	k3-aoshima@hhc.eisai.co.jp
lab head
Ken Aoshima
contact affiliation	Eisai Co., Ltd.
contact email	ken.aoshima@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/12/PXD001259

PRIDE project URI

• PRIDE
  1. PXD001259
     1. Label: PRIDE project
     2. Name: Stadard peptide mixture plus HeLa