PXD001201

PXD001201 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Surfacome analysis of Lactobacillus rhamnosus GG and Lactobacillus rhamnosus Lc705
Description	The present study reports comparative surfacomics (study of cell-surface exposed proteins) of the probiotic Lactobacillus rhamnosus strain GG and the dairy strain Lc705.
HostingRepository	PRIDE
AnnounceDate	2016-07-01
AnnouncementXML	Submission_2016-07-01_01:09:29.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD001201
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Tuula Nyman
SpeciesList	scientific name: Lactobacillus; NCBI TaxID: 1578;
ModificationList	phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	QSTAR

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2014-08-05 07:11:53	ID requested
⏵ 1	2016-07-01 01:09:30	announced

Publication List

Espino E, Koskenniemi K, Mato-Rodriguez L, Nyman TA, Reunanen J, Koponen J, Ö, hman T, Siljam, ä, ki P, Alatossava T, Varmanen P, Savijoki K, Uncovering surface-exposed antigens of Lactobacillus rhamnosus by cell shaving proteomics and two-dimensional immunoblotting. J Proteome Res, 14(2):1010-24(2015) [pubmed]

Espino E, Koskenniemi K, Mato-Rodriguez L, Nyman TA, Reunanen J, Koponen J, Ö, hman T, Siljam, ä, ki P, Alatossava T, Varmanen P, Savijoki K, Uncovering surface-exposed antigens of Lactobacillus rhamnosus by cell shaving proteomics and two-dimensional immunoblotting. J Proteome Res, 14(2):1010-24(2015) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: L. rhamnosus GG and L. rhamnosus Lc705, cell-surface bound proteins, LC-MS/MS

curator keyword: Biological

submitter keyword: L. rhamnosus GG and L. rhamnosus Lc705, cell-surface bound proteins, LC-MS/MS

Contact List

Tuula A Nyman
contact affiliation	Institution of Biotechnology University of Helsinki Finland
contact email	tuula.nyman@helsinki.fi
lab head
Tuula Nyman
contact affiliation	Institute of Biotechnology
contact email	tuula.nyman@helsinki.fi
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/07/PXD001201
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/07/PXD001201

PRIDE project URI

Repository Record List

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