PXD000999

PXD000999 is an original dataset announced via ProteomeXchange.

Title	DeMix:efficient identification of co-fragmented peptides
Description	A data analysis workflow with a simple deconvolution method based on high resolution data-dependent tandem mass spectrometry.
HostingRepository	PRIDE
AnnounceDate	2014-10-23
AnnouncementXML	Submission_2014-10-23_03:56:34.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Bo Zhang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2014-05-23 01:31:19	ID requested
1	2014-08-14 05:23:39	announced
⏵ 2	2014-10-23 03:56:35	announced	Updated project metadata.

Zhang B, Pirmoradian M, Chernobrovkin A, Zubarev RA, DeMix workflow for efficient identification of cofragmented peptides in high resolution data-dependent tandem mass spectrometry. Mol Cell Proteomics, 13(11):3211-23(2014) [pubmed]

curator keyword: Technical

submitter keyword: HeLa, Orbitrap, Deep proteomics

Roman A. Zubarev
contact affiliation	Division of Chemistry I, Head Department of Medical Biochemistry & Biophysics Karolinska Institutet Scheelesväg 2, SE 17177 Stockholm, Sweden
contact email	Roman.Zubarev@ki.se
lab head
Bo Zhang
contact affiliation	Karolinska Institutet
contact email	bo.zhang@ki.se
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/08/PXD000999

PRIDE project URI

• PRIDE
  1. PXD000999
     1. Label: PRIDE project
     2. Name: DeMix:efficient identification of co-fragmented peptides