PXD000980

PXD000980 is an original dataset announced via ProteomeXchange.

Title	The proteome of Synechocystis sp. PCC 6803 cells grown under light-activated heterotrophic growth
Description	Cyanobacteria are photoautotrophic prokaryotes with a plant-like photosynthetic machinery. Besides being able to grow photoautotrophically, some cyanobacteria are also capable to grow photoheterotrophically, where they use reduced organic compounds as carbon source, or even completely heterotrophically by using reduced organic compounds as carbon and energy source. The well characterized cyanobacterium Synechocystis sp. PCC 6803 can grow in darkness under light-activated heterotrophic growth (LAHG) conditions by using glucose as carbon and energy source. In the present work, we combined pre-fractioning of Synechocystis cellular membranes with a global proteome and lipidome analysis, to shift the analytical focus towards the rearrangement of the internal thylakoid membrane system observed in Synechocystis cells under LAHG conditions.
HostingRepository	PRIDE
AnnounceDate	2015-03-03
AnnouncementXML	Submission_2015-03-03_07:05:41.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000980
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Nicole Plohnke
SpeciesList	scientific name: Synechocystis sp. PCC 6803; NCBI TaxID: 1148;
ModificationList	No PTMs are included in the dataset
Instrument	Thermo Scientific instrument model

Revision	Datetime	Status	ChangeLog Entry
0	2014-05-16 01:22:49	ID requested
⏵ 1	2015-03-03 07:05:42	announced

Plohnke N, Seidel T, Kahmann U, R, ö, gner M, Schneider D, Rexroth S, The proteome and lipidome of Synechocystis sp. PCC 6803 cells grown under light-activated heterotrophic conditions. Mol Cell Proteomics, 14(3):572-84(2015) [pubmed]

curator keyword: Biological

submitter keyword: Shotgun proteomics, Synechocystis, Light-activated heterotrophic growth

Sascha Rexroth
contact affiliation	Faculty of biology and biotechnology Plant biochemistry Ruhr-Univerity Bochum Germany
contact email	Sascha.Rexroth@rub.de
lab head
Nicole Plohnke
contact affiliation	Ruhr University Bochum
contact email	Nicole.Plohnke@rub.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/03/PXD000980

PRIDE project URI

• PRIDE
  1. PXD000980
     1. Label: PRIDE project
     2. Name: The proteome of Synechocystis sp. PCC 6803 cells grown under light-activated heterotrophic growth