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PXD000954

PXD000954 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleThe Pan-Human Library: A repository of assays to quantify 10 000 proteins by SWATH-MS / SWATH-MS validation data
DescriptionThe “Pan-Human Library” is a compendium of highly specific assays covering more than 10 000 human proteins and enabling their targeted analysis in SWATH-MS datasets acquired from research or clinical specimens. This dataset contains validation SWATH-MS data and OpenSWATH results of whole cell lysates of HeLa (guot_L130330_005_SW, guot_L130330_006_SW, guot_L130330_007_SW) and U2OS cells (gout_L130330_013_SW, gout_L130330_014_SW, gout_L130330_015_SW). Further, the combined assay library (phl004_s32.csv) and the sample-specific assay libraries (phl004_sshela_s32.csv, phl004_ssu2os.csv) used for the analysis are provided.
HostingRepositoryPRIDE
AnnounceDate2014-10-23
AnnouncementXMLSubmission_2015-09-23_05:52:25.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterGeorge Rosenberger
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListNo PTMs are included in the dataset
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02014-05-02 07:08:38ID requested
12014-08-08 05:42:06announced
22014-10-23 03:38:56announcedUpdated project metadata.
32015-09-23 05:52:26announcedUpdated project metadata.
Publication List
Rosenberger G, Koh CC, Guo T, Röst HL, Kouvonen P, Collins BC, Heusel M, Liu Y, Caron E, Vichalkovski A, Faini M, Schubert OT, Faridi P, Ebhardt HA, Matondo M, Lam H, Bader SL, Campbell DS, Deutsch EW, Moritz RL, Tate S, Aebersold R, A repository of assays to quantify 10,000 human proteins by SWATH-MS. Sci Data, 1():140031(2014) [pubmed]
Keyword List
curator keyword: Biological, Technical
submitter keyword: Human, SWATH-MS, SWATH, Targeted Proteomics, Pan-Human Library, OpenSWATH
Contact List
Ruedi Aebersold
contact affiliationInstitute of Molecular Systems Biology ETH Zurich
contact emailaebersold@imsb.biol.ethz.ch
lab head
George Rosenberger
contact affiliationInstitute of Molecular Systems Biology ETH Zurich
contact emailrosenberger@imsb.biol.ethz.ch
dataset submitter
Full Dataset Link List
Dataset FTP location
PRIDE project URI
Repository Record List
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