PXD000936 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | iTRAQ based quantify for pseudomonas |
Description | The iTRAQ-LC–MS/MS strategy was used for quantitative analysis to reveal the global response of P. aeruginosa SJTD-1 to the stimuli of C18 alkane in this study. As a result, 476 proteins were identified with a significant different expression levels for the growth on n-octadecane, accounting for 8.4% of the 5618 predicted or hypothetical proteins encoded by the strain SJTD-1 genome. These differently expressed proteins were believed to play an important role in multiple biochemical pathways. |
HostingRepository | PRIDE |
AnnounceDate | 2022-02-22 |
AnnouncementXML | Submission_2022-02-22_03:41:41.050.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD000936 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Jingli Hou |
SpeciesList | scientific name: Pseudomonas aeruginosa SJTD-1; NCBI TaxID: 1193501; |
ModificationList | iTRAQ4plex-116 reporter+balance reagent acylated residue; methylthiolated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | maXis |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2014-04-28 03:34:07 | ID requested | |
⏵ 1 | 2022-02-22 03:41:41 | announced | |
Publication List
Liu H, Sun WB, Liang RB, Huang L, Hou JL, Liu JH, iTRAQ-based quantitative proteomic analysis of Pseudomonas aeruginosa SJTD-1: A global response to n-octadecane induced stress. J Proteomics, 123():14-28(2015) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: iTRAQ, proteomics, Pseudomonas aeruginosa SJTD-1, n-octadecane |
Contact List
Jingli Hou |
contact affiliation | Instrumental Analysis Center of Shanghaijiaotong university |
contact email | hopie00@sjtu.edu.cn |
lab head | |
Jingli Hou |
contact affiliation | instrumental analysis center |
contact email | hopie00@sjtu.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD000936 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD000936
- Label: PRIDE project
- Name: iTRAQ based quantify for pseudomonas