PXD000922 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Mycoplasma gallisepticum S6 |
Description | Avian bacterial pathogen M. gallisepticum is a good model for transcriptional regulation studies due to its small genome and relative simplicity. Here we used RNA-Seq combined with MS-spec proteomics to accurately map coding sequences (CDSs), transcription start sites (TSSs) and transcription terminators (TTs) and decipher their role in stress-induced transcriptional response. |
HostingRepository | PRIDE |
AnnounceDate | 2014-11-12 |
AnnouncementXML | Submission_2014-11-12_03:03:33.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD000922 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Ilya Altukhov |
SpeciesList | scientific name: Mycoplasma gallisepticum S6; NCBI TaxID: 1006581; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2014-04-23 02:28:44 | ID requested | |
⏵ 1 | 2014-11-12 03:03:35 | announced | |
Publication List
Mazin PV, Fisunov GY, Gorbachev AY, Kapitskaya KY, Altukhov IA, Semashko TA, Alexeev DG, Govorun VM, Transcriptome analysis reveals novel regulatory mechanisms in a genome-reduced bacterium. Nucleic Acids Res, 42(21):13254-68(2014) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Mycoplasma, gallisepticum,S6, heat shock |
Contact List
Govorun Vadim Markovich |
contact affiliation | Research Institute of Physical Chemical Medicine |
contact email | govorun@hotmail.ru |
lab head | |
Ilya Altukhov |
contact affiliation | Research Institute of Physical Chemical Medicin |
contact email | ilya.altukhov@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/11/PXD000922 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD000922
- Label: PRIDE project
- Name: Mycoplasma gallisepticum S6