PXD000922

PXD000922 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mycoplasma gallisepticum S6
Description	Avian bacterial pathogen M. gallisepticum is a good model for transcriptional regulation studies due to its small genome and relative simplicity. Here we used RNA-Seq combined with MS-spec proteomics to accurately map coding sequences (CDSs), transcription start sites (TSSs) and transcription terminators (TTs) and decipher their role in stress-induced transcriptional response.
HostingRepository	PRIDE
AnnounceDate	2014-11-12
AnnouncementXML	Submission_2014-11-12_03:03:33.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000922
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Ilya Altukhov
SpeciesList	scientific name: Mycoplasma gallisepticum S6; NCBI TaxID: 1006581;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2014-04-23 02:28:44	ID requested
⏵ 1	2014-11-12 03:03:35	announced

Publication List

Mazin PV, Fisunov GY, Gorbachev AY, Kapitskaya KY, Altukhov IA, Semashko TA, Alexeev DG, Govorun VM, Transcriptome analysis reveals novel regulatory mechanisms in a genome-reduced bacterium. Nucleic Acids Res, 42(21):13254-68(2014) [pubmed]

Mazin PV, Fisunov GY, Gorbachev AY, Kapitskaya KY, Altukhov IA, Semashko TA, Alexeev DG, Govorun VM, Transcriptome analysis reveals novel regulatory mechanisms in a genome-reduced bacterium. Nucleic Acids Res, 42(21):13254-68(2014) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Mycoplasma, gallisepticum,S6, heat shock

curator keyword: Biological

submitter keyword: Mycoplasma, gallisepticum,S6, heat shock

Contact List

Govorun Vadim Markovich
contact affiliation	Research Institute of Physical Chemical Medicine
contact email	govorun@hotmail.ru
lab head
Ilya Altukhov
contact affiliation	Research Institute of Physical Chemical Medicin
contact email	ilya.altukhov@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/11/PXD000922
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/11/PXD000922

PRIDE project URI

Repository Record List

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