PXD000851

PXD000851 is an original dataset announced via ProteomeXchange.

Title	Membrane proteomic analysis of colorectal cancer tissue
Description	We performed shotgun proteomics of colorectal cancer tissue and premalignant lesions using iTRAQ to identify biomarker candidate proteins for colorectal cancer.
HostingRepository	PRIDE
AnnounceDate	2014-07-24
AnnouncementXML	Submission_2014-07-24_05:15:48.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hideaki Kume
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetic acid derivatized residue; iTRAQ4plex-116 reporter+balance reagent acylated residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2014-03-19 02:45:27	ID requested
1	2014-04-02 03:07:34	announced
⏵ 2	2014-07-24 05:15:48	announced	Updated project metadata.

Kume H, Muraoka S, Kuga T, Adachi J, Narumi R, Watanabe S, Kuwano M, Kodera Y, Matsushita K, Fukuoka J, Masuda T, Ishihama Y, Matsubara H, Nomura F, Tomonaga T, Discovery of colorectal cancer biomarker candidates by membrane proteomic analysis and subsequent verification using selected reaction monitoring (SRM) and tissue microarray (TMA) analysis. Mol Cell Proteomics, 13(6):1471-84(2014) [pubmed]

curator keyword: Biomedical

submitter keyword: Human, colorectal cancer, membrane protein

Takeshi Tomonaga
contact affiliation	Laboratory of Proteome Research, National Institute of Biomedical Innovation
contact email	tomonaga@nibio.go.jp
lab head
Hideaki Kume
contact affiliation	Laboratory of Proteome Research, National Institute of Biomedical Innovation
contact email	hkume@nibio.go.jp
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/04/PXD000851

PRIDE project URI

• PRIDE
  1. PXD000851
     1. Label: PRIDE project
     2. Name: Membrane proteomic analysis of colorectal cancer tissue