PXD000845
PXD000845 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | ATAQS T-47D cell line |
| Description | T-47D human ductal breast epithelial tumor cell line, unfractionated cell lysate. This sample was used to measure 50 peptides from 32 protein kinases via SRM to illustrate the ATAQS software described in Brusniak et al. BMC Bioinformatics 2011, 12:78. |
| HostingRepository | PeptideAtlas |
| AnnounceDate | 2014-03-19 |
| AnnouncementXML | Submission_2014-03-19_09:50:45.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Terry Farrah |
| SpeciesList | scientific name: Homo sapiens; NCBI TaxID: 9606; |
| ModificationList | S-carboxamidomethyl-L-cysteine |
| Instrument | 4000 Q-Trap |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2014-03-17 12:28:58 | ID requested | |
| 1 | 2014-03-18 09:55:58 | announced | |
| ⏵ 2 | 2014-03-19 09:50:46 | announced | update review level |
Publication List
| Brusniak MY, Kwok ST, Christiansen M, Campbell D, Reiter L, Picotti P, Kusebauch U, Ramos H, Deutsch EW, Chen J, Moritz RL, Aebersold R, ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry. BMC Bioinformatics, 12():78(2011) [pubmed] |
Keyword List
| curator keyword: selected reaction monitoring, SRM, targeted |
Contact List
| Terry Farrah | |
|---|---|
| contact affiliation | ISB |
| contact email | terry.farrah@systemsbiology.org |
| dataset submitter | |
| Ruedi Aebersold | |
| contact affiliation | IMSB |
| contact email | aebersold@imsb.biol.ethz.ch |
| lab head | |
Full Dataset Link List
| PeptideAtlas dataset URI |
| PASSEL experiment URI |
| PASSEL transition group browser URI |
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