<< Full experiment listing


DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2014-07-24
  • AnnouncementXML: Submission_2014-07-24_05:15:24.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Emma Timmins-Schiffman
  • Title: Pacific Oyster Ctenidia Proteomics
  • Description: Pacific oysters (Crassostrea gigas) were exposed to either 400 ľatm (control) or 2800 ľatm (ocean acidification) of pCO2 for 1 month. At the end of 1 month, half of the oysters from each pCO2 treatment were subjected to an additional mechanical stimulation. Gill (ctenidia) tissue was excised from 4 oysters from each of 4 treatments - 400 and 2800 ľatm with and without mechanical stimulation. Tandem mass spectrometry was performed on all 16 samples on a LTQ Orbitrap XL with 3 technical replicates per biological sample.
  • SpeciesList: scientific name: Crassostrea gigas (Pacific oyster) (Crassostrea angulata); NCBI TaxID: 29159;
  • ModificationList: No PTMs are included in the dataset
  • Instrument: LTQ Orbitrap

Dataset History

VersionDatetimeStatusChangeLog Entry
02014-03-17 03:41:10ID requested
12014-05-15 03:33:27announced
22014-07-24 05:15:25announcedUpdated project metadata.

Publication List

  1. Dataset with its publication pending

Keyword List

  1. curator keyword: Biological
  2. submitter keyword: Pacific oyster, ocean acidification

Contact List

    Steven Roberts
    • contact affiliation: School of Aquatic and Fishery Sciences, University of Washington, Seattle, WA, USA
    • contact email: sr320@uw.edu
    • lab head:
    Emma Timmins-Schiffman
    • contact affiliation: University of Washington
    • contact email: emsie25@gmail.com
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List

If you have a question or comment about ProteomeXchange, please contact us!
to receive all new ProteomeXchange dataset release announcements!