PXD000741 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | TMT-switch assay for the detection of SNO |
Description | To maximize SNO-proteome coverage and ensure capture of all modified sites, different experimental configurations using both iodo- and cysTMT were evaluated. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:19:31.361.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Heaseung Chung |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | TMT6plex-126 reporter+balance reagent acylated residue; cysTMT6plex-zero reporter+balance reagent cysteine disulfide; N-ethylmaleimide derivatized cysteine; monohydroxylated residue |
Instrument | LTQ Orbitrap Velos; LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2014-02-05 08:06:49 | ID requested | |
1 | 2016-12-23 07:11:18 | announced | |
2 | 2017-10-24 03:39:48 | announced | Updated project metadata. |
⏵ 3 | 2024-10-22 04:19:32 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1161/CIRCRESAHA.115.307336; |
Chung HS, Murray CI, Venkatraman V, Crowgey EL, Rainer PP, Cole RN, Bomgarden RD, Rogers JC, Balkan W, Hare JM, Kass DA, Van Eyk JE, Dual Labeling Biotin Switch Assay to Reduce Bias Derived From Different Cysteine Subpopulations: A Method to Maximize S-Nitrosylation Detection. Circ Res, 117(10):846-57(2015) [pubmed] |
Keyword List
submitter keyword: S-nitrosylation, S-nitrosation,Tandem Mass Tag |
Contact List
Heaseung Sophia Chung |
contact affiliation | Johns Hopkins University |
contact email | hchung26@jhmi.edu |
lab head | |
Heaseung Chung |
contact affiliation | JHMI |
contact email | hchung26@jhmi.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD000741 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD000741
- Label: PRIDE project
- Name: TMT-switch assay for the detection of SNO