PXD000741

PXD000741 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	TMT-switch assay for the detection of SNO
Description	To maximize SNO-proteome coverage and ensure capture of all modified sites, different experimental configurations using both iodo- and cysTMT were evaluated.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:19:31.361.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Heaseung Chung
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; cysTMT6plex-zero reporter+balance reagent cysteine disulfide; N-ethylmaleimide derivatized cysteine; monohydroxylated residue
Instrument	LTQ Orbitrap Velos; LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2014-02-05 08:06:49	ID requested
1	2016-12-23 07:11:18	announced
2	2017-10-24 03:39:48	announced	Updated project metadata.
⏵ 3	2024-10-22 04:19:32	announced	2024-10-22: Updated project metadata.

Publication List

10.1161/CIRCRESAHA.115.307336;
Chung HS, Murray CI, Venkatraman V, Crowgey EL, Rainer PP, Cole RN, Bomgarden RD, Rogers JC, Balkan W, Hare JM, Kass DA, Van Eyk JE, Dual Labeling Biotin Switch Assay to Reduce Bias Derived From Different Cysteine Subpopulations: A Method to Maximize S-Nitrosylation Detection. Circ Res, 117(10):846-57(2015) [pubmed]

10.1161/CIRCRESAHA.115.307336;

Chung HS, Murray CI, Venkatraman V, Crowgey EL, Rainer PP, Cole RN, Bomgarden RD, Rogers JC, Balkan W, Hare JM, Kass DA, Van Eyk JE, Dual Labeling Biotin Switch Assay to Reduce Bias Derived From Different Cysteine Subpopulations: A Method to Maximize S-Nitrosylation Detection. Circ Res, 117(10):846-57(2015) [pubmed]

Keyword List

submitter keyword: S-nitrosylation, S-nitrosation,Tandem Mass Tag

submitter keyword: S-nitrosylation, S-nitrosation,Tandem Mass Tag

Contact List

Heaseung Sophia Chung
contact affiliation	Johns Hopkins University
contact email	hchung26@jhmi.edu
lab head
Heaseung Chung
contact affiliation	JHMI
contact email	hchung26@jhmi.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD000741
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD000741

PRIDE project URI

Repository Record List

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