PXD000672

PXD000672 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	PCT-SWATH kidney tissues
Description	DDA and SWATH analysis of human kidney tissues. Data set used for PCT-SWATH paper. PCT-SWATH provides the first method to generate a digital map representing the proteome of biopsy level clinical samples from which thousands of proteins can be accurately quantified with a high degree of reproducibility across sample sets.
HostingRepository	PRIDE
AnnounceDate	2015-02-20
AnnouncementXML	Submission_2015-06-01_07:15:52.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tiannan Guo
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2014-01-08 02:44:08	ID requested
1	2015-02-04 07:35:04	announced
2	2015-02-20 00:30:35	announced	Updated project metadata.
⏵ 3	2015-06-01 07:15:53	announced	Updated project metadata.

Publication List

Guo T, Kouvonen P, Koh CC, Gillet LC, Wolski WE, R, ö, st HL, Rosenberger G, Collins BC, Blum LC, Gillessen S, Joerger M, Jochum W, Aebersold R, Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps. Nat Med, 21(4):407-13(2015) [pubmed]

Guo T, Kouvonen P, Koh CC, Gillet LC, Wolski WE, R, ö, st HL, Rosenberger G, Collins BC, Blum LC, Gillessen S, Joerger M, Jochum W, Aebersold R, Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps. Nat Med, 21(4):407-13(2015) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: PCT-SWATH
kidney tissues

curator keyword: Biomedical

submitter keyword: PCT-SWATH

kidney tissues

Contact List

Ruedi Aebersold
contact affiliation	ETH Zurich, Switzerland
contact email	aebersold@imsb.biol.ethz.ch
lab head
Tiannan Guo
contact affiliation	ETH Zurich
contact email	tiannan.guo@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/02/PXD000672
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/02/PXD000672

PRIDE project URI

Repository Record List

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