PXD000579

PXD000579 is an original dataset announced via ProteomeXchange.

Title	A proteome reference map of the wine lactic acid bacterium Oenococcus oeni ATCC BAA-1163
Description	Oenococcus oeni is the main lactic acid bacterium that carries out the malolactic fermentation in virtually all red wines and in some white and sparkling wines. O. oeni possesses an array of metabolic activities which can modify the taste and aromatic properties of wine. There is therefore industrial interest in the proteins involved in these metabolic pathways and related transport systems of this bacterium. In this work, we report the characterization of the O. oeni ATCC BAA-1163 proteome. Total and membrane protein preparations from O. oeni were standardized and analyzed by two-dimensional gel electrophoresis. Using tandem mass spectrometry we identified 226 different polypeptides corresponding to 155 unique proteins, which have been classified by their putative function and subjected to bioinformatics analysis.
HostingRepository	PRIDE
AnnounceDate	2014-07-28
AnnouncementXML	Submission_2014-07-28_00:50:38.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000579
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Sergio Ciordia Higuera
SpeciesList	scientific name: Oenococcus oeni; NCBI TaxID: 1247;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	instrument model: 4800 Plus MALDI TOF/TOF

Revision	Datetime	Status	ChangeLog Entry
0	2013-11-13 02:18:41	ID requested
1	2014-04-16 13:53:11	announced
⏵ 2	2014-07-28 00:50:39	announced	Updated project metadata.

Mohedano Mde L, Russo P, de Los R, í, os V, Capozzi V, Fern, á, ndez de Palencia P, Spano G, L, ó, pez P, A partial proteome reference map of the wine lactic acid bacterium Oenococcus oeni ATCC BAA-1163. Open Biol, 4(2):130154(2014) [pubmed]

submitter keyword: Oenococcus oeni, MALDI, MIAPE

Sergio Ciordia Higuera
contact affiliation	Proteomics Unit
contact email	proteomics.masas@cnb.csic.es
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD000579
     1. Label: PRIDE project
     2. Name: A proteome reference map of the wine lactic acid bacterium Oenococcus oeni ATCC BAA-1163