PXD000540

PXD000540 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Wheat leaf phosphoproteome
Description	In this study, we performed a large-scale leaf phosphoproteomic analysis of two wheat genotypes HX10 and NC47 to explore the complex protein phosphorylation network of signaling and regulatory events affecting rapid vegetative growth in wheat. We used TiO2 affinity chromatography combined with LC-MS/MS and Maxquant software to identify phosphopeptides and phosphorylated sites. Finally, 2,336 phosphopeptides containing 2,734 phosphorylation sites were identified from the two wheat genotypes HX10 and NC47 in our study.
HostingRepository	PRIDE
AnnounceDate	2014-07-24
AnnouncementXML	Submission_2014-07-24_03:57:23.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Dong-Wen Lv
SpeciesList	scientific name: Triticum aestivum (Wheat); NCBI TaxID: 4565;
ModificationList	monohydroxylated residue; acetylated residue; phosphorylated residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2013-10-28 02:06:47	ID requested
1	2014-04-01 08:04:02	announced
⏵ 2	2014-07-24 03:57:24	announced	Updated project metadata.

Publication List

Lv DW, Ge P, Zhang M, Cheng ZW, Li XH, Yan YM, Integrative network analysis of the signaling cascades in seedling leaves of bread wheat by large-scale phosphoproteomic profiling. J Proteome Res, 13(5):2381-95(2014) [pubmed]

Lv DW, Ge P, Zhang M, Cheng ZW, Li XH, Yan YM, Integrative network analysis of the signaling cascades in seedling leaves of bread wheat by large-scale phosphoproteomic profiling. J Proteome Res, 13(5):2381-95(2014) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: wheat, phosphoproteome, leaf, regulatory network, growth

curator keyword: Biological

submitter keyword: wheat, phosphoproteome, leaf, regulatory network, growth

Contact List

Yue-Ming Yan
contact affiliation	College of Life Science, Capital Normal University, Beijing 100048, China
contact email	yanym@cnu.edu.cn
lab head
Dong-Wen Lv
contact affiliation	College of Life Sciences
contact email	dw.lv@hotmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/04/PXD000540
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/04/PXD000540

PRIDE project URI

Repository Record List

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