PXD000053

PXD000053 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Lotus japonicus phosphopeptide
Description	Phosphopeptides were purified using Titansphere. Before MS analysis, phosphopeptides were desalted using StageTips with C18 Empore disk membranes. Phosphopeptides were analysed by Orbitrap MS.The obtained MS and MS/MS spectra data were searched against Kazusa DNA Research Institute published lotus EST database using the MASCOT program (FDR<1%).
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_08:43:38.651.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000053
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Yoko Ino
SpeciesList	scientific name: Lotus japonicus; NCBI TaxID: 34305;
ModificationList	carbamoylated residue; phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2012-10-18 02:25:40	ID requested
1	2013-10-29 04:54:23	announced
2	2014-05-21 05:13:11	announced	Updated publication reference for PubMed record(s): 24227553.
3	2014-07-23 07:55:25	announced	Updated project metadata.
⏵ 4	2024-10-07 08:43:39	announced	2024-10-07: Updated project metadata.

Publication List

10.6019/PXD000053;
10.1002/pmic.201300237;
Ino Y, Ishikawa A, Nomura A, Kajiwara H, Harada K, Hirano H, Phosphoproteome analysis of Lotus japonicus seeds. Proteomics, 14(1):116-20(2014) [pubmed]

10.6019/PXD000053;

10.1002/pmic.201300237;

Ino Y, Ishikawa A, Nomura A, Kajiwara H, Harada K, Hirano H, Phosphoproteome analysis of Lotus japonicus seeds. Proteomics, 14(1):116-20(2014) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: phosphopeptide

curator keyword: Biological

submitter keyword: phosphopeptide

Contact List

Yoko Ino
contact affiliation	Advanced medical research center
contact email	yino@tsurumi.yokohama-cu.ac.jp
lab head
Yoko Ino
contact affiliation	Advanced medical research center
contact email	yino@tsurumi.yokohama-cu.ac.jp
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2013/10/PXD000053
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2013/10/PXD000053

PRIDE project URI

Repository Record List

[ + ]