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PXD000447

PXD000447 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleChr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. Ramos Cell line.
DescriptionThe Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To do this study four human cell lines were selected, MCF7 epithelial cells, CCD18 colon fibroblasts, Ramos and Jurkat B and T lymphocytes respectively. In particular, this subset includes all the data regarding the Ramos cell line. 3 laboratories contributed to compile all the reported data.
HostingRepositoryPRIDE
AnnounceDate2013-09-05
AnnouncementXMLSubmission_2013-09-05_07:47:41.xml
DigitalObjectIdentifierhttp://dx.doi.org/10.6019/PXD000447
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterAlberto Medina-Aunon
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListfragment neutral loss: 0.0; monohydroxylated residue; deaminated residue; iodoacetamide derivatized residue; fragment neutral loss: 63.998285
Instrumentcollision gas; collision gas
Dataset History
RevisionDatetimeStatusChangeLog Entry
02013-09-03 12:18:36ID requested
12013-09-05 07:47:41announced
12013-11-20 05:10:54announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: HPP,MIAPE,Networking,Chromosome centric
Contact List
Mikel Azkargorta
contact attributeDepartment:Proteomics Platform Position:lab personnel Address:Servicio Proteómica CIC bioGUNE. Parque Tecnológico de Bizkaia. Edif. 800 48160 DERIO- BIZKAIA e-mail:mazkargorta@cicbiogune.es Telephone:94 406 1329
contact affiliationCIC bioGUNE
contact emailmazkargorta@cicbiogune.es
Alberto Medina-Aunon
contact affiliationCentro Nacional de Biotecnologia, CSIC, Madrid, Spain.
contact emailjamedina@cnb.csic.es
Marta Mendes
contact attributeDepartment:Medicina Molecular - Proteomica Funcional Position:researcher Address:Ramiro de Maeztu, 9 28040 Madrid e-mail:m.mendes@cib.csic.es Telephone:+34 91 837 31 12 ext 4364
contact affiliationCIB
contact emailm.mendes@cib.csic.es
Eliandre De Oliveira
contact attributeDepartment:Proteomics Platform Position:researcher Address:Plataforma de Proteňmica PCB - Edifici Clúster Baldiri Reixac, 10 08028 Barcelona Tel 93 403 46 53 Fax 93 403 72 06 pproteomica@pcb.ub.es http://www.pcb.ub.cat/plataforma/proteomica e-mail:eoliveira@pcb.ub.es Telephone:934037206
contact affiliationPCB
contact emailpproteomica@pcb.ub.es
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