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PXD000443

PXD000443 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleChr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. Jurkat Cell line.
DescriptionThe Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To do this study four human cell lines were selected, MCF7 epithelial cells, CCD18 colon fibroblasts, Ramos and Jurkat B and T lymphocytes respectively. In particular, this subset includes all the data regarding the Jurkat cell line. 2 laboratories contributed to compile all the reported data.
HostingRepositoryPRIDE
AnnounceDate2013-09-05
AnnouncementXMLSubmission_2013-09-05_04:20:25.xml
DigitalObjectIdentifierhttp://dx.doi.org/10.6019/PXD000443
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterAlberto Medina-Aunon
SpeciesList scientific name: Homo Sapiens; NCBI TaxID: 9606; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListiodoacetamide derivatized residue; acetylated residue; fragment neutral loss: 63.998285; monohydroxylated residue; fragment neutral loss: 0.0
Instrumentcollision gas; dissociation method
Dataset History
RevisionDatetimeStatusChangeLog Entry
02013-09-03 02:07:02ID requested
12013-09-05 04:20:25announced
12013-11-19 16:36:37announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: HPP,MIAPE,Networking,Chromosome centric
Contact List
Alberto Medina-Aunon
contact affiliationCentro Nacional de Biotecnologia, CSIC, Madrid, Spain.
contact emailjamedina@cnb.csic.es
Kerman Aloria
contact attributeDepartment:Proteomics Core facility e-mail:kerman.aloria@ehu.es
contact affiliationUniversity of the Basque Country
contact emailkerman.aloria@ehu.es
Severine Gharbi
contact attributeDepartment:Proteomics Unit Position:researcher e-mail:sgharbi@cnb.csic.es
contact affiliationCNB-CSIC
contact emailsgharbi@cnb.csic.es
Full Dataset Link List
Dataset FTP location
Repository Record List
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