PXD000431

PXD000431 is an original dataset announced via ProteomeXchange.

Title	Identifcation of Adiponectin and Evidence for Post-Translational Modifications in the Bottlenose Dolphin (Tursiops truncatus)
Description	A Multiple Affinity Removal System (MARS) Human 14 spin cartridge was used to deplete a dolphin serum which was then digested with trypsin and analyzed without prior fractionation by nanoLC-MS/MS. These files are associated with '2011-9-25_Neely-DolphinSerum.' The database used for searching is included, which from Ensembl but names were added. Additionally, a non-depleted dolphin sera that had been digested followed by quasi-fractionation using SPE, was analyzed by nano-LC-MS/MS which lead to an additional peptide identification, KGEPGESAYVYR, and these files are associated with '2012-12-12 Dolphin IDA.' All permits, methods, and instrument parameters are described in a published manuscript, Neely et al., 2013 'Measurements of adiponectin by mass spectrometry in bottlenose dolphins (Tursiops truncatus) with iron overload'
HostingRepository	PRIDE
AnnounceDate	2018-11-07
AnnouncementXML	Submission_2018-11-07_05:52:58.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Benjamin Neely
SpeciesList	scientific name: Tursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus); NCBI TaxID: 9739;
ModificationList	S-(2-succinyl)-L-cysteine; O5-glucosylgalactosyl-L-hydroxylysine; oxidation; iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2013-08-27 08:58:29	ID requested
1	2013-09-23 06:52:36	announced
1	2013-10-10 03:44:06	announced
2	2014-07-25 01:36:04	announced	Updated project metadata.
3	2018-11-07 05:48:51	announced	Updated project metadata.
⏵ 4	2018-11-07 05:52:59	announced	Updated project metadata.

Dataset with its publication pending

submitter keyword: adiponectin, dolphin, Tursiops truncatus, PTMs

Benjamin Neely
contact affiliation	Medical University of South Carolina
contact email	benaneely@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2013/09/PXD000431

PRIDE project URI

• PRIDE
  1. PXD000431
     1. Label: PRIDE project
     2. Name: Identifcation of Adiponectin and Evidence for Post-Translational Modifications in the Bottlenose Dolphin (Tursiops truncatus)