PXD000388

PXD000388 is an original dataset announced via ProteomeXchange.

Title	Subcellular proteomic survey of Salmonella
Description	The project performed a subcellular proteomic analysis of Salmonella enterica subsp. enterica serovar Typhimurium str. 14028 grown under standard laboratory and phagosome-mimicking conditions in vitro. Analysis of proteins from cytoplasmic, inner membrane, periplasmic, and outer membrane fractions yielded coverage of 25% of the theoretical proteome. Confident subcellular location could be assigned to over 1000 proteins, with good agreement between experimentally observed location and predicted/known protein properties. Comparison of protein location under the different environmental conditions provided insight into dynamic protein localization and possible moonlighting (multiple function) activities.
HostingRepository	PRIDE
AnnounceDate	2014-08-08
AnnouncementXML	Submission_2014-08-08_00:31:03.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Salmonella typhimurium (strain 14028s / SGSC 2262); NCBI TaxID: 588858;
ModificationList	Oxidation
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2013-08-01 04:12:23	ID requested
1	2013-10-07 03:56:36	announced
1	2013-10-07 08:29:33	announced
2	2014-07-25 01:27:48	announced	Updated project metadata.
⏵ 3	2014-08-08 00:31:04	announced	Updated project metadata.

Brown RN, Sanford JA, Park JH, Deatherage BL, Champion BL, Smith RD, Heffron F, Adkins JN, A Comprehensive Subcellular Proteomic Survey of Salmonella Grown under Phagosome-Mimicking versus Standard Laboratory Conditions. Int J Proteomics, 2012():123076(2012) [pubmed]

curator keyword: Biomedical, Biological

submitter keyword: subcellular, localization, cytoplasmic, inner membrane, periplasmic, outer membrane

Matthew Monroe
contact affiliation	Biological Separations & Mass Spectrometry
contact email	matthew.monroe@pnl.gov
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2013/10/PXD000388

PRIDE project URI

• PRIDE
  1. PXD000388
     1. Label: PRIDE project
     2. Name: Subcellular proteomic survey of Salmonella