PXD000298

PXD000298 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Neospora Caninum whole proteome study
Description	MS/MS dataset for proteogenomics study of Neospora Caninum. The dataset was searched against the official v10 gene model from ToxoDB, and the alternate panels of proteins predicted from RNA-SEQ evidences.
HostingRepository	PRIDE
AnnounceDate	2015-02-20
AnnouncementXML	Submission_2015-04-16_05:32:28.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ritesh Krishna
SpeciesList	scientific name: Neospora Caninum (strain Liverpool); NCBI TaxID: 572307;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2013-06-24 08:19:58	ID requested
1	2015-02-09 10:54:14	announced
2	2015-02-16 01:36:41	announced	Updated project metadata.
3	2015-02-16 01:43:18	announced	Updated project metadata.
4	2015-02-20 00:30:43	announced	Updated project metadata.
⏵ 5	2015-04-16 05:32:30	announced	Updated project metadata.

Publication List

Krishna R, Xia D, Sanderson S, Shanmugasundram A, Vermont S, Bernal A, Daniel-Naguib G, Ghali F, Brunk BP, Roos DS, Wastling JM, Jones AR, A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum. Proteomics, 15(15):2618-28(2015) [pubmed]

Krishna R, Xia D, Sanderson S, Shanmugasundram A, Vermont S, Bernal A, Daniel-Naguib G, Ghali F, Brunk BP, Roos DS, Wastling JM, Jones AR, A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum. Proteomics, 15(15):2618-28(2015) [pubmed]

Keyword List

curator keyword: Biological, Technical
submitter keyword: Neospora caninum, proteogenomics

curator keyword: Biological, Technical

submitter keyword: Neospora caninum, proteogenomics

Contact List

Ritesh Krishna
contact affiliation	Institute of Integrative Biology, University of Liverpool
contact email	riteshk@liv.ac.uk
lab head
Ritesh Krishna
contact affiliation	Institute of Integrative Biology
contact email	riteshk@liv.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/02/PXD000298
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/02/PXD000298

PRIDE project URI

Repository Record List

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