PXD000223

PXD000223 is an original dataset announced via ProteomeXchange.

Title	Nipped in the bud: a microbial effector destabilizes MADS-domain transcription factors
Description	Eluates from pull down experiments were separated on an SDS gel, and bands isolated for in gel trypsin digestion. Digested samples were analysed by LCMSMS on an Orbitrap. Peaklists were generated using MaxQuant 1.3.0.5 and database searches performed using Mascot Server 2.4. Data from all gel slices from one sample were merged in one Mascot search, and the results were imported into Scaffold 4.0.4.
HostingRepository	PRIDE
AnnounceDate	2014-07-24
AnnouncementXML	Submission_2014-07-24_03:47:15.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000223
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Gerhard Saalbach
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; ubiquitination signature dipeptidyl lysine
Instrument	LTQ Orbitrap; instrument model: LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2013-04-24 01:55:21	ID requested
1	2014-05-21 02:58:06	announced
⏵ 2	2014-07-24 03:47:16	announced	Updated project metadata.

MacLean AM, Orlovskis Z, Kowitwanich K, Zdziarska AM, Angenent GC, Immink RG, Hogenhout SA, Phytoplasma effector SAP54 hijacks plant reproduction by degrading MADS-box proteins and promotes insect colonization in a RAD23-dependent manner. PLoS Biol, 12(4):e1001835(2014) [pubmed]

curator keyword: Biological

submitter keyword: Arabidopsis, Co-IP, GFP, SAP54, phytoplasma, MADS-box, effector, flower, destabilization, Orbitrap

Gerhard Saalbach
contact affiliation	Biological Chemistry
contact email	gerhard.saalbach@jic.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/05/PXD000223

PRIDE project URI

• PRIDE
  1. PXD000223
     1. Label: PRIDE project
     2. Name: Nipped in the bud: a microbial effector destabilizes MADS-domain transcription factors