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PXD000093

DataSet Summary

  • HostingRepository: PeptideAtlas
  • AnnounceDate: 2014-03-12
  • AnnouncementXML: Submission_2014-03-12_13:28:13.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Supported dataset by repository
  • PrimarySubmitter: Aleksey Filimonov
  • Title: Human Chr18. 23 light endogenous peps for 19 prots (Zgoda, et al.)
  • Description: Dataset bio1 was acquired to detect and quantitate proteotypic peptides of 19 human proteins encoded by chromosome 18. SRM-data was acquired from 23 light endogenous peptides of Human Depleted Plasma (HPL), Human Liver (HLV) and Hep G2 cell line (HG2).
  • SpeciesList: scientific name: Homo sapiens; NCBI TaxID: 9606;
  • ModificationList: No PTMs are included in the dataset
  • Instrument: Agilent 6410 Triple Quad

Dataset History

VersionDatetimeStatusChangeLog Entry
02012-12-10 17:30:15ID requested
12012-12-10 17:31:24announced
22012-12-11 11:43:02announcedmissing
32014-03-12 13:28:13announcedupdate LabHead

Publication List

  1. Zgoda VG, Kopylov AT, Tikhonova OV, Moisa AA, Pyndyk NV, Farafonova TE, Novikova SE, Lisitsa AV, Ponomarenko EA, Poverennaya EV, Radko SP, Khmeleva SA, Kurbatov LK, Filimonov AD, Bogolyubova NA, Ilgisonis EV, Chernobrovkin AL, Ivanov AS, Medvedev AE, Mezentsev YV, Moshkovskii SA, Naryzhny SN, Ilina EN, Kostrjukova ES, Alexeev DG, Tyakht AV, Govorun VM, Archakov AI, Chromosome 18 transcriptome profiling and targeted proteome mapping in depleted plasma, liver tissue and HepG2 cells. J Proteome Res, 12(1):123-34(2013) [pubmed]

Keyword List

  1. curator keyword: selected reaction monitoring, SRM, targeted

Contact List

    Aleksey Filimonov
    • contact affiliation: IMSB
    • contact email: filimonov.a.d@gmail.com
    • dataset submitter:
    Alexander Archakov
    • contact affiliation: IMSB
    • contact email: alexander.archakov@ibmc.msk.ru
    • lab head:

Full Dataset Link List

  1. PeptideAtlas dataset URI
  2. PASSEL experiment URI
  3. PASSEL transition group browser URI

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