PXD000083

PXD000083 is an original dataset announced via ProteomeXchange.

Title	Glycosyltransferases from oat (Avena) implicated in the acylation of avenacins
Description	To study glycosyltransferases from oat, root proteins were extracted and separated gy 1D SDS gel electrophoresis. Bands were cut out, digested with trypsin, and the resulting peptides were analysed by LCMSMS on an Orbitrap mass sepctrometer. Raw data was processed with MaxQuant 1.3.0.5, and database searches on a custom database performed using Mascot.
HostingRepository	PRIDE
AnnounceDate	2013-04-24
AnnouncementXML	Submission_2013-04-24_05:23:09.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000083
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Gerhard Saalbach
SpeciesList	scientific name: Avena strigosa (black oat); NCBI TaxID: 38783;
ModificationList	iodoacetamide derivatized residue; monohydroxylated residue
Instrument	radial ejection linear ion trap

Revision	Datetime	Status	ChangeLog Entry
0	2012-12-03 08:49:47	ID requested
1	2013-04-24 04:27:19	announced
1	2014-07-28 00:25:59	announced
⏵ 2	2013-04-24 05:23:09	announced	Add reference

Owatworakit A, Townsend B, Louveau T, Jenner H, Rejzek M, Hughes RK, Saalbach G, Qi X, Bakht S, Roy AD, Mugford ST, Goss RJ, Field RA, Osbourn A, Glycosyltransferases from oat (Avena) implicated in the acylation of avenacins. J Biol Chem, 288(6):3696-704(2013) [pubmed]

submitter keyword: Terpenes

saponin

glycosyltransferase

cereals

Anne Osbourn
contact attribute	Anne.Osbourn@jic.ac.uk
contact affiliation	John Innes Centre
contact email	Anne.Osbourn@jic.ac.uk
Gerhard Saalbach
contact affiliation	Biological Chemistry
contact email	gerhard.saalbach@jic.ac.uk

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/2013/04/PXD000083

• PRIDE
  1. 27977
     1. InstrumentRef: INSTRUMENT_1
     2. Label: SAD1
     3. ModificationList: iodoacetamide derivatized residue, monohydroxylated residue,
     4. Name: SAD1
     5. PublicationRef: PMID23258535
  2. 27978
     1. InstrumentRef: INSTRUMENT_1
     2. Label: SAD2
     3. ModificationList: iodoacetamide derivatized residue, monohydroxylated residue,
     4. Name: SAD2
     5. PublicationRef: PMID23258535