PXD000055

PXD000055 is an original dataset announced via ProteomeXchange.

Title	Casein Kinase 1 functions in eukaryotic non-transcriptional time keeping
Description	Proteomics section: 300ug of rotein extract from Ostreococcus tauri cells were reduced alkylated and trypsin digested. Phosphopeptide enrichment done on a Titanium dioxide column. LC-MS analysis performed on a cap-HPLC-MS (Orbitrap XL). Data analysis: Data were searched using Mascot. Peptide quantitation performed with Progenesis. Position of the phosphorylated amino acid confirmed with Maxquant and manual validation.
HostingRepository	PRIDE
AnnounceDate	2015-09-15
AnnouncementXML	Submission_2015-09-15_05:02:42.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000055
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Thierry Le Bihan
SpeciesList	scientific name: Ostreococcus tauri; NCBI TaxID: 70448;
ModificationList	monohydroxylated residue; acetylated residue; phosphorylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap; instrument model: LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2012-10-18 08:46:14	ID requested
⏵ 1	2015-09-15 05:02:43	announced

Kon, í, ckov, á Z, Mat, ĕ, j, í, cek V, Vrabec R, Methodic experience with determination of endotoxin in the serum. Acta Chir Plast, 15(3):170-5(1973) [pubmed]

submitter keyword: Phosphoproteomics, label-free quantitative analysis, Ostreococcus tauri, casein kinase 1, circadian rhythm

Thierry Le Bihan
contact affiliation	SynthSys, Synthetic and Systems Biology, School of Biological Sciences, University of Edinburgh, Room 3.06, C.H Waddington Building, Max Born Crescent, Edinburgh, EH9 3BF
contact email	Thierry.lebihan@ed.ac.uk
lab head
Thierry Le Bihan
contact affiliation	Centre for Systems biology at edinburgh
contact email	thierry.lebihan@ed.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/09/PXD000055

PRIDE project URI

• PRIDE
  1. PXD000055
     1. Label: PRIDE project
     2. Name: Casein Kinase 1 functions in eukaryotic non-transcriptional time keeping