PXD000046

PXD000046 is an original dataset announced via ProteomeXchange.

Title	Mouse Cerebellum DNA-Damage 2D LC-MS/MS
Description	Whole mice cerebella tissue was lysed, reduced, alkylated and digested. Three time points of control and KO tissue was labeled using dimethyl isotope labeling. After combination SCX fractionation was performed followed by RP LC-MS/MS analysis using an Orbitrap Velos and top 10 HCD fragmentation.
HostingRepository	PRIDE
AnnounceDate	2015-02-17
AnnouncementXML	Submission_2015-02-17_02:57:03.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Erik L. de Graaf
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2012-10-05 06:02:12	ID requested
1	2014-03-05 03:32:57	announced
2	2014-07-25 00:40:29	announced	Updated project metadata.
⏵ 3	2015-02-17 02:57:04	announced	Updated project metadata.

de Graaf EL, Vermeij WP, de Waard MC, Rijksen Y, van der Pluijm I, Hoogenraad CC, Hoeijmakers JH, Altelaar AF, Heck AJ, Spatio-temporal analysis of molecular determinants of neuronal degeneration in the aging mouse cerebellum. Mol Cell Proteomics, 12(5):1350-62(2013) [pubmed]

ProteomeXchange project tag: PRIME-XS Project

submitter keyword: Mouse, Cerebellum, DNA-damage, Aging

Erik L. de Graaf
contact affiliation	Biomolecular Mass Spectrometry and Proteomics Laboratory, Utrecht University, Utrecht, The Netherlands
contact email	e.l.degraaf@uu.nl
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/03/PXD000046

PRIDE project URI

• PRIDE
  1. PXD000046
     1. Label: PRIDE project
     2. Name: Mouse Cerebellum DNA-Damage 2D LC-MS/MS