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PXD000039

PXD000039 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleChr16-HPP.Pilot experiment.JPR HPP Special issue
Description"The Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To characterize the proteome of Chr16, three cell lines were selected, MCF7 breast cancer human epithelial cells, CCD18 human colon fibroblasts, and Jurkat human T lymphocytes. "
HostingRepositoryPRIDE
AnnounceDate2013-01-16Z
AnnouncementXMLSubmission_2013-01-15_17:57:52.xml
DigitalObjectIdentifierhttp://dx.doi.org/10.6019/PXD000039
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterJ. Alberto Medina-Aunon
SpeciesList scientific name: Human; NCBI TaxID: 9606;
ModificationListfragment neutral loss: 0.0; Oxidation; fragment neutral loss: 63.998285; Acetyl; Carbamidomethyl
Instrumentdissociation method
Dataset History
RevisionDatetimeStatusChangeLog Entry
02012-09-26 04:29:59ID requested
12013-01-15 01:43:52announced
22013-01-15 09:13:14announcedmissing
32013-01-15 17:57:52announcedAdd reference
Publication List
Segura V, Medina-Aunon JA, Guruceaga E, Gharbi SI, González-Tejedo C, Sánchez del Pino MM, Canals F, Fuentes M, Casal JI, Martínez-Bartolomé S, Elortza F, Mato JM, Arizmendi JM, Abian J, Oliveira E, Gil C, Vivanco F, Blanco F, Albar JP, Corrales FJ, Spanish human proteome project: dissection of chromosome 16. J Proteome Res, 12(1):112-22(2013) [pubmed]
Keyword List
submitter keyword: "HPP, Human, MIAPE"
Contact List
J. Alberto Medina-Aunon
contact affiliationCNB-CSIC. ISCIII ProteoRed. Computational Proteomics
contact emailjamedina@proteored.org
Carmen Gonzalez
contact attributeDepartment:Proteomics Unit Position:researcher e-mail:cgonzalez@cnb.csic.es
contact affiliationCNB-CSIC
contact emailcgonzalez@cnb.csic.es
Manuel Sánchez del Pino
contact attributeDepartment:Fibroblastos de colon Position:researcher Address:Dr Moliner 50, 46100 Burjassot Valencia e-mail:sandelpi@uv.es Telephone:96-3543464
contact affiliationUV
contact emailsandelpi@uv.es
Severine Gharbi
contact attributeDepartment:Proteomics Unit Position:researcher e-mail:sgharbi@cnb.csic.es
contact affiliationCNB-CSIC
contact emailsgharbi@cnb.csic.es
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