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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2013-01-16Z
  • AnnouncementXML: Submission_2013-01-15_17:57:52.xml
  • DigitalObjectIdentifier: http://dx.doi.org/10.6019/PXD000039
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Supported dataset by repository
  • PrimarySubmitter: J. Alberto Medina-Aunon
  • Title: Chr16-HPP.Pilot experiment.JPR HPP Special issue
  • Description: "The Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To characterize the proteome of Chr16, three cell lines were selected, MCF7 breast cancer human epithelial cells, CCD18 human colon fibroblasts, and Jurkat human T lymphocytes. "
  • SpeciesList: scientific name: Human; NCBI TaxID: 9606;
  • ModificationList: fragment neutral loss: 0.0; Oxidation; fragment neutral loss: 63.998285; Acetyl; Carbamidomethyl
  • Instrument: dissociation method

Dataset History

VersionDatetimeStatusChangeLog Entry
02012-09-26 04:29:59ID requested
12013-01-15 01:43:52announced
22013-01-15 09:13:14announcedmissing
32013-01-15 17:57:52announcedAdd reference

Publication List

  1. Segura V, Medina-Aunon JA, Guruceaga E, Gharbi SI, González-Tejedo C, Sánchez del Pino MM, Canals F, Fuentes M, Casal JI, Martínez-Bartolomé S, Elortza F, Mato JM, Arizmendi JM, Abian J, Oliveira E, Gil C, Vivanco F, Blanco F, Albar JP, Corrales FJ, Spanish human proteome project: dissection of chromosome 16. J Proteome Res, 12(1):112-22(2013) [pubmed]

Keyword List

  1. submitter keyword: "HPP, Human, MIAPE"

Contact List

    J. Alberto Medina-Aunon
    • contact affiliation: CNB-CSIC. ISCIII ProteoRed. Computational Proteomics
    • contact email: jamedina@proteored.org
    Carmen Gonzalez
    • contact attribute: Department:Proteomics Unit Position:researcher e-mail:cgonzalez@cnb.csic.es
    • contact affiliation: CNB-CSIC
    • contact email: cgonzalez@cnb.csic.es
    Manuel Sánchez del Pino
    • contact attribute: Department:Fibroblastos de colon Position:researcher Address:Dr Moliner 50, 46100 Burjassot Valencia e-mail:sandelpi@uv.es Telephone:96-3543464
    • contact affiliation: UV
    • contact email: sandelpi@uv.es
    Severine Gharbi
    • contact attribute: Department:Proteomics Unit Position:researcher e-mail:sgharbi@cnb.csic.es
    • contact affiliation: CNB-CSIC
    • contact email: sgharbi@cnb.csic.es

Full Dataset Link List

  1. Dataset FTP location
Repository Record List

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