PXD000035

PXD000035 is an original dataset announced via ProteomeXchange.

Title	Surface Proteins of Listeria monocytogenes
Description	Listeria monocytogenes cells (strain LI0521) were digested with trypsin for the identification of surface proteins. The supernatant was filter-sterilized and subjected to identification by LC-MS/MS. Concurrently secreted or shed proteins were identified by isolating filter-sterilized supernatants following incubation of L. monocytogenes cells in buffer without trypsin. This was followed by trypsin digest of the sterilized supernatant and identification by LC-MS/MS.
HostingRepository	PRIDE
AnnounceDate	2013-08-27
AnnouncementXML	Submission_2013-08-27_07:40:34.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000035
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Min Lin
SpeciesList	scientific name: Listeria monocytogenes; NCBI TaxID: 1639;
ModificationList	monohydroxylated residue; deamidated residue; neutral loss: 63.998285; iodoacetamide derivatized residue; amidated residue
Instrument	ion trap

Revision	Datetime	Status	ChangeLog Entry
0	2012-09-24 04:22:57	ID requested
1	2013-08-27 07:15:09	announced
1	2014-07-28 00:22:23	announced
⏵ 2	2013-08-27 07:40:34	announced	Add reference

Zhang CX, Creskey MC, Cyr TD, Brooks B, Huang H, Pagotto F, Lin M, Proteomic identification of Listeria monocytogenes surface-associated proteins. Proteomics, 13(20):3040-5(2013) [pubmed]

submitter keyword: Listeria monocytogenes surface proteins, LC-MSMS

Min Lin
contact attribute	Min.Lin@inspection.gc.ca
contact affiliation	Canadian Food Inpsection Agency
contact email	Min.Lin@inspection.gc.ca

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/2013/08/PXD000035

• PRIDE
  1. 27270
     1. InstrumentRef: INSTRUMENT_1
     2. Label: F001423-20120712
     3. ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue, deamidated residue,
     4. Name: trypsin treated 1
     5. PublicationRef: PMID23970489
  2. 27269
     1. InstrumentRef: INSTRUMENT_1
     2. Label: F001422-20120712
     3. ModificationList: monohydroxylated residue, deamidated residue,
     4. Name: untreated 1
     5. PublicationRef: PMID23970489
  3. 27271
     1. InstrumentRef: INSTRUMENT_1
     2. Label: F001424-20120712
     3. ModificationList: monohydroxylated residue, iodoacetamide derivatized residue, deamidated residue,
     4. Name: trypsin treated 2
     5. PublicationRef: PMID23970489
  4. 27274
     1. InstrumentRef: INSTRUMENT_1
     2. Label: F006791-20111121
     3. ModificationList: deamidated residue, amidated residue, monohydroxylated residue, iodoacetamide derivatized residue,
     4. Name: trypsin treated 3
     5. PublicationRef: PMID23970489
  5. 27273
     1. InstrumentRef: INSTRUMENT_1
     2. Label: F006790-20111121
     3. ModificationList: deamidated residue, amidated residue, iodoacetamide derivatized residue, monohydroxylated residue,
     4. Name: untreated 3
     5. PublicationRef: PMID23970489
  6. 27272
     1. InstrumentRef: INSTRUMENT_1
     2. Label: F001425-20120712
     3. ModificationList: monohydroxylated residue, deamidated residue, iodoacetamide derivatized residue,
     4. Name: untreated 2
     5. PublicationRef: PMID23970489