PXD000011

PXD000011 is an original dataset announced via ProteomeXchange.

Title	TAP-GluN1, PSD95-TAP, WT (control) BNP-LC-MS/MS proteomics
Description	TAP-GluN1 (840 kDa and 1.5 MDa), PSD95-TAP (1.5 MDa) and WT (control; 1.5 MDa) native complexes from Grin1^TAP/TAP, Dlg4^TAP/TAP, and WT mouse forebrain (cortex and hippocampus), respectively. Purified samples were seperated by blue native PAGE. Bands were excised, digested with trypsin. Peptides were identified by LC-MS/MS.
HostingRepository	PRIDE
AnnounceDate	2016-04-20
AnnouncementXML	Submission_2016-05-03_07:55:13.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD000011
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Rene Frank
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	iodoacetamide - site C: 57.021464; 2-pyrrolidone-5-carboxylic acid (Gln): -17.026549; monohydroxylated residue: 15.994915; phosphorylated residue: 79.966331
Instrument	LTQ Orbitrap; instrument model: LTQ-Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2012-08-02 03:02:46	ID requested
1	2016-04-20 03:10:33	announced
⏵ 2	2016-05-03 07:55:14	announced	Updated publication reference for PubMed record(s): 27117477.

Frank RA, Komiyama NH, Ryan TJ, Zhu F, O'Dell TJ, Grant SG, NMDA receptors are selectively partitioned into complexes and supercomplexes during synapse maturation. Nat Commun, 7():11264(2016) [pubmed]

submitter keyword: NMDAR, synapse, native complexes

Seth Grant
contact affiliation	Centre for Clinical Brain Sciences, University of Edinburgh, Chancellor’s Building, 49 Little France Crescent, Edinburgh EH16 4SB, UK
contact email	sgng@staffmail.ed.ac.uk
lab head
Rene Frank
contact affiliation	University of Edinburgh
contact email	rfrank2@staffmail.ed.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/04/PXD000011

PRIDE project URI

• PRIDE
  1. PXD000011
     1. Label: PRIDE project
     2. Name: TAP-GluN1, PSD95-TAP, WT (control) BNP-LC-MS/MS proteomics