| PXD001611 | Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium | PRIDE | Mycoplasma pneumoniae M29 | LTQ Orbitrap | Lluch-Senar et al. (2015) | Javier Delgado | Luis Serrano | 2015-03-03 |
| PXD000719 | Rat Brain LC-MS/MS | PRIDE | Rattus norvegicus | LTQ Orbitrap Elite | Wildburger et al. (2015) | Norelle Wildburger | Carol Lynn Nilsson | 2015-03-03 |
| PXD000980 | The proteome of Synechocystis sp. PCC 6803 cells grown under light-activated heterotrophic growth | PRIDE | Synechocystis sp. PCC 6803 | Thermo Scientific instrument model | Plohnke et al. (2015) | Nicole Plohnke | Sascha Rexroth | 2015-03-03 |
| PXD001349 | Redox proteomics of Arabidopsis cells under salicylate and flg22 treatments | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Liu et al. (2015) | Pei Liu | Yiji Xia | 2015-03-03 |
| PXD001860 | PNNL Biodiversity Library - Microbial Section | MassIVE | Acidiphilium cryptum JF-5, Actinosynnema mirum DSM 43827, Anabaena variabilis, Anaeromyxobacter dehalogenans, Anaplasma phagocytophilum, Arthrobacter sp. FB24, Bacillus anthracis str. Ames, Bacillus anthracis str. Sterne, Bacillus subtilis subsp. subtilis | LTQ; LTQ FT; LTQ Orbitrap; LTQ Orbitrap Velos | Dataset with its publication pending | Sam Payne | Sam Payne | 2015-03-02 |
| PXD001681 | HA-mSLX4 wild type and SIMdependent interactors | PRIDE | Homo sapiens , Mus musculus | Q Exactive | González-Prieto et al. (2015) | Román González-Prieto | Alfred C O Vertegaal | 2015-03-02 |
| PXD001594 | Specific growth rate-dependent proteome resource allocation dynamics in Escherichia coli | PRIDE | Escherichia coli | LTQ Orbitrap | Peebo et al. (2015) | Karl Peebo | Raivo Vilu | 2015-02-27 |
| PXD001362 | Direct evidence of milk consumption from ancient human dental calculus, UK | PRIDE | Homo sapiens | LTQ Orbitrap Velos; Q Exactive; LTQ Orbitrap Elite | Warinner et al. (2014) | Jessica Hendy | Matthew Collins | 2015-02-26 |
| PXD001359 | Direct evidence of milk consumption from ancient human dental calculus, northern southwest Asia | PRIDE | Homo sapiens | Q Exactive | Warinner et al. (2014) | Jessica Hendy | Matthew Collins | 2015-02-26 |
| PXD001272 | Giardia duodenalis Assemblage A Quantitative Proteomics | PRIDE | Giardia intestinalis assemblage A | LTQ | Dataset with its publication pending | Samantha Emery | Professor Paul A Haynes | 2015-02-26 |
| PXD001573 | Enrichment or depletion? The impact of stool pretreatment on metaproteomic characterization of the human gut microbiota | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Tanca et al. (2015) | Alessandro Tanca | Maria Filippa Addis | 2015-02-25 |
| PXD001361 | Direct evidence of milk consumption from ancient human dental calculus, northern Europe | PRIDE | Homo sapiens | LTQ Orbitrap Velos; Q Exactive | Warinner et al. (2014) | Jessica Hendy | Matthew Collins | 2015-02-25 |
| PXD001360 | Direct evidence of milk consumption from ancient human dental calculus, central Europe | PRIDE | Homo sapiens | Q Exactive | Warinner et al. (2014) | Jessica Hendy | Matthew Collins | 2015-02-25 |
| PXD001357 | Direct evidence of milk consumption from ancient human dental calculus, St Helena | PRIDE | Homo sapiens | Q Exactive; LTQ Orbitrap Elite | Warinner et al. (2014) | Jessica Hendy | Matthew Collins | 2015-02-25 |
| PXD001241 | ERLIC-based strategies for combined quantitative proteome and phosphoproteome analysis with limited sample amounts | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Loroch et al. (2015) | Stefan Loroch | Albert Sickmann | 2015-02-25 |
| PXD001644 | Proteomic analysis of Bombus terrestris queen haemolymph | PRIDE | Bombus terrestris (Buff-tailed bumblebee) (Apis terrestris) | LTQ Orbitrap XL | Dataset with its publication pending | James Carolan | James C Carolan | 2015-02-24 |
| PXD001612 | Roles of proteome dynamics and cytokinin signaling in root-to-hypocotyl ratio changes induced by shading roots of Arabidopsis seedlings | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | maXis | Novák et al. (2015) | Martin Cerny | Martin Cerny | 2015-02-23 |
| PXD001213 | Tissue Engineered Rat Lung Proteomics | PRIDE | Rattus norvegicus | LTQ Orbitrap Velos | Hill et al. (2015) | Ryan Hill | Kirk Hansen | 2015-02-20 |
| PXD000808 | Transcriptome and Proteomic Analysis of Mango (Mangifera indica Linn) Fruits | PRIDE | Mangifera indica | LTQ Orbitrap Velos | Wu et al. (2014) | Hongxia Wu | Hongxia Wu | 2015-02-20 |
| PXD001527 | Proteomics of muscle chronological ageing in post-menopausal women | PRIDE | Homo sapiens | LTQ Velos | Gueugneau et al. (2014) | Coudy-Gandilhon cécile | Bechet Daniel | 2015-02-19 |
| PXD000164 | A Metaproteomics Approach to Elucidate Host and Pathogen Protein Expression during Catheter-Associated Urinary Tract Infections | PRIDE | Pseudomonas sp., Homo sapiens , Morganella, Morganella | LTQ Orbitrap Velos | Lassek et al. (2015) | Christian Lassek | Katharina Riedel | 2015-02-17 |
| PXD001377 | Unraveling Lysine Deacetylase Inhibitor Specificities for Endogenous Acetylation Sites | PRIDE | Homo sapiens , Mus musculus | Q Exactive | Dataset with its publication pending | Christian Schölz | Chunaram Choudhary | 2015-02-16 |
| PXD000876 | Proteomic analysis of three Borrelia burgdorferi sensu lato species and disseminating clones: relevance for Lyme vaccine design. | PRIDE | Borrelia burgdorferi 297 | ion trap | Schnell et al. (2014) | Schnell Gilles | Laurence Sabatier | 2015-02-16 |
| PXD001811 | Proteome analysis of human lymphotropic tumor viruses | MassIVE | Homo sapiens | LTQ; LTQ XL ETD | Dresang et al. (2011) | Matthew Monroe | Richard D. Smith | 2015-02-12 |
| PXD001467 | Proteome resource allocation in bacteria | PRIDE | Escherichia coli | TripleTOF 5600 | Dataset with its publication pending | Sheng Hui | Terence Hwa | 2015-02-12 |
| PXD001401 | Phytophthora hyphae and cysts | PRIDE | Phytophthora sojae, Phytophthora pisi | LTQ Orbitrap Velos | Hosseini et al. (2015) | Svante Resjo | Erik Andreasson | 2015-02-10 |
| PXD001536 | Fast Profiling of Protease Specificity reveals similar substrate specificities for cathepsins K, L and S | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Vizovišek et al. (2015) | Emmy Van Quickelberghe | Kris Gevaert | 2015-02-10 |
| PXD001293 | Comaprison of the phagosome proteome of bone marrow-derived macrophages and RAW264.7 | PRIDE | Mus musculus | Q Exactive | Guo et al. (2014) | Matthias Trost | Matthias Trost | 2015-02-10 |
| PXD001553 | Proteomic profiling of cathepsin specificity by FPPS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Vizovišek et al. (2015) | Marko Fonovic | Marko Fonovic | 2015-02-10 |
| PXD001479 | The gut microbiota affects the mucus barrier | PRIDE | Mus musculus | LTQ Orbitrap | Jakobsson et al. (2015) | Ana M. Rodriguez-Pineiro | Gunnar C. Hansson | 2015-02-09 |
| PXD000298 | Neospora Caninum whole proteome study | PRIDE | Neospora Caninum (strain Liverpool) | LTQ Orbitrap Velos | Dataset with its publication pending | Ritesh Krishna | Ritesh Krishna | 2015-02-09 |
| PXD000297 | Toxoplsama Gondii whole proteome study | PRIDE | Toxoplasma gondii RH | LTQ Orbitrap | Dataset with its publication pending | Ritesh Krishna | Andrew Jones | 2015-02-09 |
| PXD001434 | Interaction of cGMP-dependent protein kinase and HAP1 | PRIDE | Homo sapiens , Rattus norvegicus | LTQ Orbitrap; LTQ Orbitrap Velos | Corradini et al. (2015) | Eleonora Corradini | Albert J.R. Heck | 2015-02-09 |
| PXD001462 | Identification of Alpha-Synuclein Interacting Synaptosomal Proteins | PRIDE | Sus scrofa domesticus (domestic pig) | LTQ Orbitrap | Betzer et al. (2015) | Min Shi | Poul Henning Jensen | 2015-02-09 |
| PXD001448 | Myotubularin-related proteins control abscission_StDenis_MTMR_P84_VS6-7-8-11-12 | MassIVE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Gingras Lab | Anne-Claude Gingras | 2015-02-06 |
| PXD001641 | Single muscle fiber proteomics reveals unexpected mitochondrial specialization | PRIDE | Mus musculus | Q Exactive | Murgia et al. (2015) | Mario Oroshi | Matthias Mann | 2015-02-05 |
| PXD000782 | A quantitative proteomics tool to identify DNA-protein interactions in primary cells or blood | PRIDE | Homo sapiens | Q Exactive | Hubner et al. (2015) | Nina Hubner | Hendrik G. Stunnenberg | 2015-02-04 |
| PXD000672 | PCT-SWATH kidney tissues | PRIDE | Homo sapiens | TripleTOF 5600 | Dataset with its publication pending | Tiannan Guo | Ruedi Aebersold | 2015-02-04 |
| PXD001065 | Compartment resolved reference map from highly purified naive, activated, effector and memory CD8+ cells | PRIDE | Mus musculus | LTQ Orbitrap Velos | Zanker et al. (2015) | Janina Tomm | Martin von Bergen | 2015-02-04 |
| PXD001648 | Characterization of the E.coli proteome and its modifications during growth and ethanol stress | PRIDE | Escherichia coli | LTQ Orbitrap Elite | Dataset with its publication pending | Karsten Krug | Boris Macek | 2015-02-03 |
| PXD000660 | TAILS with Arabidopsis thaliana wilde typ, tic56-1and ppi2 | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Köhler et al. (2015) | Sacha Baginsky | Sacha Baginsky | 2015-02-03 |
| PXD001207 | The proteome of tic56-1 plastids after thermolysin treatment | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Köhler et al. (2015) | Sacha Baginsky | Sacha Baginsky | 2015-02-03 |
| PXD000737 | iTRAQ-based quantitative proteomics analysis of human HNSCC cells | PRIDE | Homo sapiens | LTQ Orbitrap | Syed et al. (2015) | Akhilesh Pandey | Akhilesh Pandey | 2015-02-02 |
| PXD001180 | Human brain phosphoproteome analyzed by refined phosphopeptide enrichment and high resolution LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Tan et al. (2015) | xusheng wang | Junmin Peng | 2015-02-02 |
| PXD001677 | SIM-XL: a powerful and user-friendly tool for peptide cross-linking analysis | PRIDE | Homo sapiens | Q Exactive | Lima et al. (2015) | Diogo Borges Lima | Paulo Costa Carvalho | 2015-02-02 |
| PXD001771 | ddDT results from 2014 MCP alpha-lytic protease proteomics paper | MassIVE | Schizosaccharomyces pombe | instrument model: LTQ Orbitrap Velos ETD | Dataset with its publication pending | Jesse Meyer | EA Komives | 2015-01-30 |
| PXD000994 | TurboRAW2MGF: Removing isobaric-related ions improves the peptide/protein identification | PRIDE | Homo sapiens , Rattus norvegicus | LTQ Orbitrap Velos | Sheng et al. (2014) | Quanhu Sheng | Quanhu Sheng | 2015-01-30 |
| PXD001101 | Identifying novel targets of oncogenic EGF receptor signaling in lung cancer through global phosphoproteomics | PRIDE | Homo sapiens | LTQ Orbitrap; LTQ Orbitrap Elite | Zhang et al. (2015) | Udayan Guha | Udayan Guha | 2015-01-30 |
| PXD001117 | Human Cardiac Stem Cells Receptome | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Gomes-Alves et al. (2014) | Patrícia Gomes-Alves | Paula M. Alves | 2015-01-30 |
| PXD001183 | Proteomic characterisation of microtubule-dependent modulation of adhesion complexes | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Ng et al. (2014) | Daniel Ng | Martin James Humphries | 2015-01-30 |
| PXD001493 | YBX1 interacting protein | PRIDE | Homo sapiens | LTQ Orbitrap | Wang et al. (2014) | Ruibing Chen | Ruibing Chen | 2015-01-30 |
| PXD001524 | Human testicular matrix | PRIDE | Homo sapiens | LTQ Orbitrap | Baert et al. (2015) | Michael Landreh | Hans Jornvall | 2015-01-30 |
| PXD001574 | Phospho-iTRAQ | PRIDE | Homo sapiens | Q Exactive; TripleTOF 5600; Synapt MS | Glibert et al. (2015) | Maarten Dhaenens | Dieter Deforce | 2015-01-30 |
| PXD001761 | Spike-in dilution series in S. pyogenes cell lysate, (Chawade et al. 2014) | PeptideAtlas | Streptococcus pyogenes | TSQ Vantage | Chawade et al. (2014) | Fredrik Levander | Fredrik Levander | 2015-01-29 |
| PXD001760 | SWATH Analysis of Yeast Proteome over Time in Response to Osmotic Stress: SRM Dataset | PeptideAtlas | Saccharomyces cerevisiae | TSQ Vantage | Selevsek et al. (2015) | Lucia Espona Pernas | Ruedi Aebersold | 2015-01-29 |
| PXD001759 | Mouse Liver Proteins implicated in Metabolism and Type 2 Diabetes. | PeptideAtlas | Mus musculus | 4000 QTRAP | no publication | Alexander Schäfer | Prof. Dr. Marius Ueffing | 2015-01-29 |
| PXD001757 | Study of EphA2 involvement in cancer cells TEM | PeptideAtlas | Homo sapiens | TSQ Vantage | Locard-Paulet, et al. (submitted) | Marie Locard-Paulet | Claus Jorgensen | 2015-01-29 |
| PXD001756 | Targeted proteomic analyses of nasal lavage fluid in persulfate-challenged hairdressers with bleaching powder-associated rhinitis | PeptideAtlas | Homo sapiens | QTRAP 5500 | Mörtstedt et al. (2015) | Neserin Ali | Division of Occupational and Environmental Medicine | 2015-01-29 |
| PXD001755 | RPD and SID calibration standards for four human plasma peptides in various complex matrices | PeptideAtlas | Homo sapiens | 4000 QTRAP | Yau et al. (2014) | Yunki Yau | Prof. Mark Raftery | 2015-01-29 |
| PXD001754 | Identification of Biomarkers for the Diagnosis of Rickettsial Disease: Qualification | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Kizhake Soman | Allan R. Brasier | 2015-01-29 |
| PXD001753 | Helicobacter Pylori-Induced PUD Biomarkers Qualification | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Kizhake Soman | Allan R. Brasier, MD | 2015-01-29 |
| PXD001752 | Dengue Fever (Brazil) biomarkers - Qualification | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Kizhake Soman | Allan R. Brasier | 2015-01-29 |
| PXD001751 | Human Serum LC-MRM-MS data collected from two cohorts of HCC and cirrhosis patients | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Habtom Ressom | Habtom W. Ressom | 2015-01-29 |
| PXD001750 | Extended MRM/SRM experiment for 112 Mouse/Rat Brian Proteins | PeptideAtlas | Mus musculus | QTRAP 5500 | Wei, et al. (submitted) | Christopher Colangelo | Christopher Colangelo | 2015-01-29 |
| PXD001749 | Targeted Proteome Pipeline and Assay for 112 Rat Brain Synaptic Proteins, Data Collection | PeptideAtlas | Rattus norvegicus | TripleTOF 5600 | Colangelo et al. (2014) | Christopher Colangelo | Christopher Colangelo | 2015-01-29 |
| PXD001748 | Candidate Biomarkers for Invasive Aspergillosis, Verification | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Kizhake Soman | Allan R. Brasier | 2015-01-29 |
| PXD001747 | PBMC Proteomic Analysis for the Identification of Biomarkers of Chagasic Cardiomyopathy | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Kizhake Soman | Allan R. Brasier | 2015-01-29 |
| PXD001746 | Signal transduction reaction monitoring deciphers site-specific PI3K-mTOR/MAPK pathway dynamics | PeptideAtlas | Homo sapiens | TSQ Vantage | Graaf, et al. | Erik de Graaf | Albert J.R. Heck | 2015-01-29 |
| PXD001745 | Automated Absolute and Relative Quantification of SRM Data | PeptideAtlas | Drosophila melanogaster | TSQ Vantage | Unpublished | Sandra Goetze | Erich Brunner | 2015-01-29 |
| PXD001744 | Label-free quantification of sentinel proteins, phosphopeptides and degradation products | PeptideAtlas | Saccharomyces cerevisiae | QTRAP 5500 | Soste et al. (2014) | Martin Soste | Paola Picotti | 2015-01-29 |
| PXD000984 | Quantitative phosphoproteomic analysis of IL-33 mediated signaling | PRIDE | Mus musculus | LTQ Orbitrap Elite | Pinto et al. (2015) | Akhilesh Pandey | Akhilesh Pandey | 2015-01-29 |
| PXD001455 | Global quantitative proteomics reveals novel factors in the ecdysone signaling pathway in Drosophila melanogaster. | PRIDE | Drosophila melanogaster (Fruit fly) | Q Exactive | Sap et al. (2014) | Jeroen Demmers | Jeroen AA Demmers | 2015-01-29 |
| PXD001555 | Differentiation-inducing factor (DIF) SILAC | PRIDE | Dictyostelium discoideum (Slime mold) | LTQ Orbitrap Elite | Sugden et al. (2014) | Chris Sugden | JEFF WILLIAMS | 2015-01-28 |
| PXD001186 | A role for CPT1A to prevent blood vessel permeability revealed by in depth proteomics | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Dataset with its publication pending | Sara Zanivan | Sara Zanivan | 2015-01-28 |
| PXD001656 | Quantitative proteomic analysis of Burkholderia pseudomallei Bsa Type III secretion system effectors using hyper-secreting mutants | PRIDE | Burkholderia pseudomallei (strain K96243) | LTQ Orbitrap Velos | Dataset with its publication pending | Charles Vander Broek | Jo M. Stevens | 2015-01-28 |
| PXD001059 | Differences in oocyte composition anticipate differences in embryo quality: a proteomic study in inbred mice | PRIDE | Mus musculus | LTQ Orbitrap Velos | Pfeiffer et al. (2014) | Hannes Drexler | Hannes C. A. Drexler | 2015-01-28 |
| PXD001153 | Quantitative Phosphoproteomics Reveals Crosstalk Between Phosphorylation and O-GlcNAc in the DNA Damage Response Pathway | PRIDE | Mus musculus | LTQ Orbitrap Velos | Zhong et al. (2015) | Akhilesh Pandey | Akhilesh Pandey | 2015-01-28 |
| PXD001584 | Importance of arginine trasporter ArgP in Francisella by comparative proteomics. | PRIDE | Francisella tularensis subsp. novicida (strain U112) | Q Exactive | Ramond et al. (2015) | Chiara guerrera | Ida Chiara GUERRERA | 2015-01-28 |
| PXD001194 | PROMIS-Quan: a novel proteomic method for plasma biomarker quantification | PRIDE | Homo sapiens | Q Exactive | Dataset with its publication pending | Tamar Geiger | Tamar Geiger | 2015-01-28 |
| PXD000155 | Proteomic analysis of integrin activation-state-dependent adhesion complexes | PRIDE | Homo sapiens | instrument model: LTQ Velos; LTQ Velos | Byron et al. (2015) | Adam Byron | | 2015-01-27 |
| PXD001370 | Aging Mouse Brain Mitochondria LC-MS/MS | PRIDE | Mus musculus | TripleTOF 5600 | Stauch et al. (2014) | Kelly Stauch | Howard Fox | 2015-01-27 |
| PXD001733 | Lenalidomide Causes Selective Degradation of IKZF1 and IKZF3 in Multiple Myeloma Cells | MassIVE | Homo sapiens | Q Exactive | Dataset with its publication pending | Karl Clauser | Steven A. Carr | 2015-01-26 |
| PXD001343 | Characterization of the gila monster (Heloderma suspectum suspectum) venom proteome | PRIDE | Heloderma suspectum suspectum (Reticulate Gila monster) | TripleTOF 5600 | Sanggaard et al. (2015) | Thomas F. Dyrlund | Jan Johannes Enghild | 2015-01-26 |
| PXD001453 | Spatial variation in transcript and protein abundance of Atlantic salmon during feeding migration in the Baltic Sea | PRIDE | Salmo salar (Atlantic salmon) | LTQ Orbitrap | Kanerva et al. (2014) | Mirella Kanerva | Kristiina A. Vuori | 2015-01-26 |
| PXD000979 | K63 polyubiquitination is a new modulator of the oxidative stress response, SRM data | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | Q Exactive | Silva, Finley & Vogel (2015) | Gustavo Silva | Christine Vogel | 2015-01-26 |
| PXD000960 | K63 polyubiquitination is a new modulator of the oxidative stress response, shotgun data | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Velos | Silva, Finley & Vogel (2015) | Gustavo Silva | Christine Vogel | 2015-01-26 |
| PXD001126 | Building high-quality assay libraries for targeted analysis of SWATH MS data | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | TripleTOF 5600 | Dataset with its publication pending | Ben Collins | Ruedi Aebersold | 2015-01-26 |
| PXD001212 | A mammalian transcription factor-specific peptide repository for targeted proteomics | PRIDE | Mus musculus | LTQ Orbitrap | Simicevic et al. (2014) | Romain Hamelin | Marc Moniatte | 2015-01-23 |
| PXD001082 | Quantitative comparison of CSF proteins from T. b. gambiense and T. b. rhodesiense HAT patients | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Natalia Tiberti | Jean-Charles Sanchez | 2015-01-23 |
| PXD001010 | SWATH Analysis of Yeast Proteome over Time in Response to Osmotic Stress | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | TSQ Quantum; TripleTOF 5600 | Selevsek et al. (2015) | Lucia Espona Pernas | Ruedi Aebersold | 2015-01-22 |
| PXD001587 | DIA-Umpire: comprehensive computational framework for data independent acquisition proteomics | PRIDE | Escherichia coli, Homo sapiens | Q Exactive; TripleTOF 5600 | Tsou et al. (2015) | Chih-Chiang Tsou | Alexey I. Nesvizhskii | 2015-01-21 |
| PXD001005 | Comparative phosphoproteomic analysis of mammalian renal glomeruli | PRIDE | Rattus norvegicus , Bos taurus | LTQ Orbitrap | Rinschen et al. (2014) | Markus Rinschen | Markus Rinschen | 2015-01-16 |
| PXD001246 | Synechocystis 6803 LC-MS/MS | PRIDE | Synechocystis sp. PCC 6803 | LTQ Orbitrap Elite | Gao et al. (2014) | Yingchun Wang | Yingchun Wang | 2015-01-16 |
| PXD001068 | Phosphoproteome dynamics in onset and maintenance of Oncogene-Induced Senescence, proteome dataset | PRIDE | Homo sapiens | LTQ Orbitrap Velos | de Graaf et al. (2014) | Erik L. de Graaf | Albert Heck | 2015-01-15 |
| PXD001667 | BioID-based identification of SCF-BTrCP1/2 E3 ligase substrates | MassIVE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Tharan Srikumar | Brian Raught | 2015-01-15 |
| PXD001492 | Yeast - phosphoproteome | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Velos | Hustedt et al. (2014) | Ragna Sack | Susan M Gasser | 2015-01-12 |
| PXD000523 | Phosphoproteome dynamics in onset and maintenance of Oncogene-Induced Senescence, phosphoproteome dataset | PRIDE | Homo sapiens | LTQ Orbitrap Velos | de Graaf et al. (2014) | Erik L. de Graaf | Albert Heck | 2015-01-12 |
| PXD000394 | Mass spectrometry of HLA-I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation | PRIDE | Homo sapiens | Q Exactive | Dataset with its publication pending | Mario Oroshi | Matthias Mann | 2015-01-12 |
| PXD001394 | Global and specific responses of the histone acetylome to systematic perturbation | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap | Dataset with its publication pending | Ignasi Forne | Prof. Dr. Peter Becker | 2015-01-09 |
| PXD000033 | ATM and ATR- dependent protein phosphorylation induced within 15 minutes after gamma irradiation in Arabidopsis thaliana | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Dataset with its publication pending | Elisabeth Roitinger | | 2015-01-09 |
| PXD001210 | An Enhanced in vivo SILAC model for Quantification of Drug Metabolism Enzymes | PRIDE | Mus musculus | LTQ Orbitrap | MacLeod et al. (2015) | Kenneth MacLeod | Jeffrey Tze-Jen Huang | 2015-01-09 |
| PXD001647 | Anopheles stephensi salivary gland LC-MS/MS | PRIDE | Anopheles stephensi (Asian malaria mosquito) | ultraflex | Dataset with its publication pending | sonam vijay | Dr. Arun Sharma | 2015-01-08 |
| PXD001651 | Q-Exactive HCD data for FFPE colon tissues (five replicate RPLC experiments) | MassIVE | Homo sapiens | Q Exactive | Dataset with its publication pending | David L. Tabb | Daniel C. Liebler | 2015-01-08 |
| PXD001657 | A Cell-based Systems Biology Assessment of Human Blood to Monitor Immune Responses After Influenza Vaccination | PRIDE | Homo sapiens | LTQ Orbitrap | Hoek et al. (2015) | Andrew Link | Andrew Link | 2015-01-08 |
| PXD001240 | Benchmarking label-free quantification based on data-independent acquisition (DIA) workflows | PRIDE | Escherichia coli, Homo sapiens , Saccharomyces cerevisiae (Baker's yeast) | Synapt MS | Kuharev et al. (2014) | Stefan Tenzer | Stefan Tenzer | 2015-01-07 |
| PXD001184 | Phosphoproteomic Analysis Suggests Compensatory Effects in the Piriform Cortex Region of the VX-Exposed Rat | PRIDE | Rattus norvegicus | LTQ Orbitrap Elite | Nirujogi et al. (2014) | Jennifer Sekowski | Jennifer W. Sekowski | 2015-01-07 |
| PXD001410 | A Themis:SHP complex promotes T cell survival | PRIDE | Homo sapiens | LTQ Orbitrap | Paster et al. (2014) | Kristin Katsch | Professor Oreste Acuto | 2015-01-07 |
| PXD001296 | Exoproteome of Aspergillus flavus corneal isolates and saprophytes | PRIDE | Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) | LTQ Orbitrap Velos | Selvam et al. (2014) | Naveen Luke | Dharmalingam Kuppamuthu | 2015-01-07 |
| PXD001224 | A High-resolution Systems-wide Screen for Substrates of the SCFβTrCP Ubiquitin Ligase - reproducibility evaluation | PRIDE | Homo sapiens | LTQ Orbitrap | Low et al. (2014) | Teck Yew Low | Albert J.R. Heck | 2015-01-06 |
| PXD001088 | A High-resolution Systems-wide Screen for Substrates of the SCFβTrCP Ubiquitin Ligase | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Low et al. (2014) | Teck Yew Low | Albert J.R. Heck | 2015-01-06 |
| PXD000175 | Proteomic analysis uncover a new function and mode of action for mDia2 | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | AFM Altelaar | Maarten Altelaar | 2015-01-06 |
| PXD001529 | Proteomic characterization of the role of Snail1 in the differentiation of 3T3-L1 fibroblasts | PRIDE | Mus musculus | LTQ Orbitrap; LTQ Orbitrap Velos | Pelaez-Garcia et al. (2014) | Alberto Pelaez Garcia | Ignacio Casal | 2015-01-06 |
| PXD001447 | AP-MS analysis of sirtuin-4 interactions in human fibroblasts | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Mathias et al. (2014) | T Greco | Ileana Cristea | 2015-01-06 |
| PXD001517 | Iridovirus and Microsporidian Linked to Honey Bee Colony Decline | MassIVE | Apis mellifera, Nosema | LTQ | Dataset with its publication pending | Giselle Knudsen | Cramer, Robert A. | 2015-01-05 |
| PXD001634 | KCMF1 links RAD6 to UBR4 and lysosome-mediated degradation | MassIVE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Tharan Srikumar | Brian Raught | 2015-01-05 |
| PXD000991 | Method to identify novel proteoform peptides from salivary supernatant. | PRIDE | Homo sapiens | LTQ Orbitrap | Jagtap et al. (2014) | Pratik Jagtap | Timothy Griffin | 2015-01-05 |
| PXD001064 | Quantitative variability of 342 plasma proteins in a human twin population | PRIDE | Homo sapiens | TripleTOF 5600 | Liu et al. (2015) | Yansheng Liu | Ruedi Aebersold | 2015-01-05 |
| PXD000549 | Quantitative proteomics of the Neisseria gonorrhoeae cell envelope and membrane vesicles | PRIDE | Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) | 4800 Proteomics Analyzer | Zielke et al. (2014) | Aleksandra Sikora | Aleksandra E. Sikora | 2014-12-19 |
| PXD001445 | Phosphoproteomic analyses reveal novel cross-modulation mechanisms between two signaling pathways in yeast | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap | Vaga et al. (2014) | Stefania Vaga | Ruedi Aebersold | 2014-12-19 |
| PXD001461 | The E. coli effector EspJ blocks Src kinase activity via amidation and ADP-ribosylation | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Andreas Schlosser | Andreas Schlosser | 2014-12-19 |
| PXD000497 | Proteomics and phosphoproteomics analysis of melanoma BRAF | PRIDE | Homo sapiens | Q Exactive; LTQ Orbitrap Velos; LTQ Orbitrap Elite | Smit et al. (2014) | Teck Yew Low | | 2014-12-19 |
| PXD001406 | Impact of Regulatory Variation from RNA to Protein | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Zia Khan | Yoav Gilad | 2014-12-19 |
| PXD001198 | In Vivo Assessment of Protease Dynamics in Cutaneous Wound Healing by Degradomics Analysis of Porcine Wound Exudates | PRIDE | Sus scrofa domesticus (domestic pig) | LTQ Orbitrap | Sabino et al. (2014) | Ulrich auf dem Keller | Ulrich auf dem Keller | 2014-12-19 |
| PXD000997 | Comprehensive Identification of Phosphorylation Sites on the Numb Endocytic Adaptor Protein | PRIDE | Homo sapiens | LTQ Orbitrap; LTQ Orbitrap Velos | Krieger et al. (2014) | Jonathan Krieger | Jane McGlade | 2014-12-16 |
| PXD001616 | A search for protein biomarkers links olfactory signal transduction to social immunity | PRIDE | Apis mellifera | LTQ Orbitrap; LTQ FT | Dataset with its publication pending | Leonard Foster | Leonard James Foster | 2014-12-16 |
| PXD001303 | Analysis of epididymal sperm maturation by top-down mass spectrometry | PRIDE | Sus scrofa domesticus (domestic pig) | LTQ Orbitrap | Labas et al. (2015) | Labas Valerie | Valérie Labas | 2014-12-16 |
| PXD001379 | LysargiNase cleavage specificity characterization | PRIDE | Escherichia coli | QSTAR | Huesgen et al. (2014) | Pitter Huesgen | Christopher M Overall | 2014-12-16 |
| PXD001378 | Characterization of LysargiNase peptide fragmentation | PRIDE | Escherichia coli | QSTAR | Huesgen et al. (2014) | Pitter Huesgen | Christopher M Overall | 2014-12-16 |
| PXD001122 | Specificity profiling of LysargiNase in comparison to trypsin | PRIDE | Escherichia coli | QSTAR | Huesgen et al. (2014) | Pitter Huesgen | Christopher M Overall | 2014-12-16 |
| PXD001121 | Characterization of LysargiNase for use in phosphoproteomics experiments, part 1 | PRIDE | Homo sapiens | LTQ Orbitrap | Huesgen et al. (2014) | Pitter Huesgen | Christopher M. Overall | 2014-12-16 |
| PXD001114 | Characterization of LysargiNase for use in phosphoproteomics experiments, partII | PRIDE | Homo sapiens | LTQ Orbitrap | Huesgen et al. (2014) | Pitter Huesgen | Christopher M. Overall | 2014-12-16 |
| PXD001113 | LysargiNase and tryptic digest of MDA-MB 231 cell lysates | PRIDE | Homo sapiens | LTQ Orbitrap | Huesgen et al. (2014) | Pitter Huesgen | Christopher M Overall | 2014-12-16 |
| PXD000114 | Metaproteomics of Premature Infant Gut Colonization | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Jacque Young | | 2014-12-16 |
| PXD001352 | Absolute protein quantification allows differentiation of cell specific metabolic routes and functions | PRIDE | Homo sapiens , Mus musculus | Q Exactive | Wiśniewski et al. (2014) | Mario Oroshi | Jacek R Wisniewski | 2014-12-15 |
| PXD000959 | N-linked glycoproteome of human seminal plasma | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Yang et al. (2014) | zhou tao | Jiahao Sha | 2014-12-15 |
| PXD001577 | Functional characteristics of neonatal rat beta cells With distinct markers | PRIDE | Rattus norvegicus | Synapt G2 MS | Martens et al. (2014) | Gertjan Kramer | J.M.F.G Aerts | 2014-12-12 |
| PXD000814 | Proteomics study of chaperone network in Escherichia coli | PRIDE | Escherichia coli | Q Exactive | Götzke et al. (2014) | Gianluca Maddalo | Albert J.R. Heck | 2014-12-12 |
| PXD001111 | Combining solid phase extraction with ultra-short gradients in LC-MS/MS substantially improves protein identification per unit of time | PRIDE | Escherichia coli, Homo sapiens | Q Exactive | Binai et al. (2014) | N. Binai | Albert Heck | 2014-12-12 |
| PXD000899 | Cell cycle dependent phosphorylation of transmembrane proteins on the Theileria annulata schizont surface | PRIDE | Theileria annulata | LTQ Orbitrap Velos | Wiens et al. (2014) | Dong Xia | Jonathan Wastling | 2014-12-12 |
| PXD001110 | The role of PRDX1 in chemoresistance | PRIDE | Homo sapiens | HCTultra | Poschmann et al. (2014) | Gereon Poschmann | Gereon Poschmann | 2014-12-12 |
| PXD000716 | Proteome-wide analysis of SUMO2 targets in response to pathological DNA replication stress in human cells | PRIDE | Homo sapiens | Q Exactive | Dataset with its publication pending | Petra Beli | Petra Beli | 2014-12-09 |
| PXD001284 | The Quantitative Changes in the Yeast Hsp70 and Hsp90 Interactomes upon DNA Damage | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap | Truman et al. (2014) | Donald Wolfgeher | Stephen J. Kron | 2014-12-08 |
| PXD001278 | Off-target responses in the HeLa proteome subsequent to transient plasmid transfection using SILAC | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Hagen et al. (2014) | Animesh Sharma | Geir Slupphaug | 2014-12-08 |
| PXD001350 | Quantitative proteomics reveals the effect of protein glycosylation in soybean root under flooding stress | PRIDE | Glycine max (Glycine hispida) | LTQ Orbitrap | Mustafa & Komatsu (2014) | Ghazala Mustafa | Setsuko Komatsu | 2014-12-08 |
| PXD000402 | Thermococcus gammatolerans shotgun analysis | PRIDE | Thermococcus gammatolerans | LTQ Orbitrap | Yang et al. (2014) | Jean ARMENGAUD | Jean Armengaud | 2014-12-04 |
| PXD001205 | Different Binding Motifs of the Celiac Disease Associated HLA Molecules DQ2.5, DQ2.2 and DQ7.5 Revealed by Relative Quantitative Proteomics of Endogenous Peptide Repertoires | PRIDE | Homo sapiens | Q Exactive | Dataset with its publication pending | Gustavo de Souza | Gustavo de Souza | 2014-12-04 |
| PXD000853 | Profiling of human lung tissues on 11 normal control, 11 patient and 11 corresponding mouse xenograft tumours | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Li et al. (2014) | Jiefei Tong | Mike F. Moran | 2014-12-04 |
| PXD001259 | Stadard peptide mixture plus HeLa | PRIDE | Homo sapiens , Bos taurus | LTQ Orbitrap | Aoshima et al. (2014) | Ken Aoshima | Ken Aoshima | 2014-12-04 |
| PXD000986 | Quantitative proteomics of soybean root during recovery after flooding | PRIDE | Glycine max (Glycine hispida) | LTQ XL | Khan et al. (2014) | Mudassar Khan | Setsuko Komatsu | 2014-12-04 |
| PXD000543 | Quantitative analysis of murine T-cells | PRIDE | Mus musculus | LTQ Orbitrap; instrument model: LTQ Orbitrap | Gruber et al. (2014) | Alexander Schmidt | | 2014-12-02 |
| PXD001075 | Identification of biomarkers for PKD1 using urinary exosomes | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Roman Zenka | Daniel McCormick | 2014-12-02 |
| PXD000834 | Positional proteomics identification of the natural substrates of cytosolic carboxypeptidases | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Tanco et al. (2014) | Sebastian Tanco | Kris Gevaert | 2014-12-02 |
| PXD001381 | Highly sensitive phosphoproteomics by tailoring solid-phase extraction to electrostatic repulsion-hydrophilic interaction chromatography | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Loroch, Zahedi & Sickmann (2014) | Stefan Loroch | Albert Sickmann | 2014-12-02 |
| PXD001270 | Identification of immunodominant antigen among Brucella species (B. abortus and B. melitensis) using hyper immune serum from naturally infected hosts | PRIDE | Brucella melitensis, Brucella abortus, Brucella | ultraflex | Dataset with its publication pending | Jayaseelan Murugaiyan | Jayaseelan Murugaiyan | 2014-12-01 |
| PXD001152 | PBC DIGE | PRIDE | Homo sapiens | 4800 Proteomics Analyzer | Dataset with its publication pending | Chuiwen Deng | Yongzhe Li | 2014-11-27 |
| PXD001242 | The proteome of normal human retina | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Zhang et al. (2014) | Pingbo Zhang | Richard D. Semba, M.D., M.P.H | 2014-11-27 |
| PXD001456 | Project Grandiose, cell surface protein capture | PRIDE | Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | Carl White | Peter W Zandstra | 2014-11-27 |
| PXD001397 | PBC-DIGE | PRIDE | Homo sapiens | 4800 Proteomics Analyzer | Dataset with its publication pending | Chuiwen Deng | Chuiwen Deng | 2014-11-27 |
| PXD000382 | MetaProSIP protein-SIP data | PRIDE | uncultured bacterium | LTQ Orbitrap | Sachsenberg et al. (2014) | Timo Sachsenberg | | 2014-11-27 |
| PXD001528 | Paraquat Exposure and Sod2 Knockdown have Dissimilar Impacts on the Drosophila melanogaster Carbonylated Protein Proteome | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap Velos | Narayanasamy et al. (2014) | David Simpson | Scott Gronert | 2014-11-26 |
| PXD001534 | IDENTIFICATION OF SUMO-2/3 MODIFIED PROTEINS ASSOCIATED WITH MITOTIC CHROMOSOMES | MassIVE | Homo sapiens | LTQ Orbitrap Velos | Cubeñas-Potts et al. (2014) | Tharan Srikumar | Michael Matunis | 2014-11-24 |
| PXD001159 | Identification of immunoreactive proteins of Mycobacterium avium subsp. Paratuberculosis | PRIDE | Other Actinobacteria , Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) | ultraflex | Piras et al. (2014) | Paola Roncada | Dr Paola Roncada | 2014-11-20 |
| PXD001386 | Plant Natriuretic Peptides induce a specific set of proteins diagnostic for an adaptive response to abiotic stress | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Dataset with its publication pending | Claudius Marondedze | Christoph Gehring | 2014-11-20 |
| PXD001091 | spike-in comparison | PRIDE | Streptoccous pyogenes | LTQ Orbitrap XL ETD | Chawade et al. (2014) | Fredrik Levander | Fredrik Levander | 2014-11-20 |
| PXD001031 | Secretome of Solanum tuberosum grown in the presence of proalexin | PRIDE | Solanum tuberosum | LTQ Orbitrap XL ETD | Burra et al. (2014) | Fredrik Levander | Fredrik Levander | 2014-11-20 |
| PXD000413 | Proteome dynamics of mouse embryonic fibroblast reprograming into iPS cells | PRIDE | Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | Marco Benevento | | 2014-11-20 |
| PXD001283 | Mass spectrometry imaging of phospholipids in mouse urinary bladder (imzML dataset) | PRIDE | Mus musculus | LTQ Orbitrap | Römpp et al. (2010) | Andreas Roempp | Bernhard Spengler | 2014-11-19 |
| PXD001301 | CRISPR-Cas9-based knockout of the prion protein and its effect on the proteome | PRIDE | Mus musculus | Orbitrap Fusion | Dataset with its publication pending | Gerold Schmitt-Ulms | Gerold Schmitt-Ulms | 2014-11-19 |
| PXD000715 | Phosphoproteome of filamentous fungus Aspergillus nidulans | PRIDE | Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) | Q Exactive | Ramsubramaniam, Harris & Marten (2014) | Nikhil Ramsubramaniam | Mark Marten | 2014-11-18 |
| PXD000837 | Proteomic analysis of plasma membrane and tonoplast from the leaves of a mangrove plant Avicennia officinalis | PRIDE | Avicennia | TripleTOF 5600 | Krishnamurthy et al. (2014) | Qingsong Lin | Assistant Professor Lin Qingsong | 2014-11-18 |
| PXD001354 | Hepatic proteome analysis of Atlantic salmon (Salmo salar) after exposure to environmental concentrations of human pharmaceuticals | PRIDE | Salmo sp. | 4800 Proteomics Analyzer | Hampel et al. (2014) | Miriam Hampel | Jesus Forja | 2014-11-18 |
| PXD001125 | Maize seedling root cells LC-MS/MS | PRIDE | Zea mays | Q Exactive | Yu et al. (2014) | Feng Yu | Fazhan Qiu | 2014-11-18 |
| PXD001414 | Tomato nuclear proteome reveals the involvement of specific E2 ubiquitin-conjugating enzymes in fruit ripening | PRIDE | Solanum lycopersicum | TripleTOF 5600 | Dataset with its publication pending | Guozheng Qin | gzqin@ibcas.ac.cn | 2014-11-18 |
| PXD000627 | Proteomic analysis of Pichia pastoris GS115 | PRIDE | Komagataella pastoris (strain GS115 / ATCC 20864) (Pichia pastoris) | LTQ Orbitrap Velos | Renuse et al. (2014) | Akhilesh Pandey | | 2014-11-18 |
| PXD001375 | Proteomic analysis of gliosomes from mouse brain for investigation of glial membrane proteins | PRIDE | Mus musculus | TripleTOF 5600 | Carney et al. (2014) | Pim van Nierop | Dr. Mark H.G. Verheijen | 2014-11-17 |
| PXD001430 | Proteomic analysis of urinary exosomes in cystinuria patients | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Bourderioux et al. (2014) | Chiara guerrera | Ida Chiara Guerrera | 2014-11-17 |
| PXD000898 | Quantitative Proteomics Reveals the Role of Protein Phosphorylation in Initial Changes of Soybean Root Tip under Flooding Stress | PRIDE | Glycine max (Glycine hispida) | LTQ Orbitrap | Yin, Sakata & Komatsu (2014) | xiaojian Yin | Setsuko Komatsu | 2014-11-13 |
| PXD000922 | Mycoplasma gallisepticum S6 | PRIDE | Mycoplasma gallisepticum S6 | TripleTOF 5600 | Mazin et al. (2014) | Ilya Altukhov | Govorun Vadim Markovich | 2014-11-12 |
| PXD001243 | change in hypopharyngeal glands of overwintering bees Proteomics | PRIDE | Sphingobium chlorophenolicum | TripleTOF 5600 | Dataset with its publication pending | Zhenguo Liu | lzhenguo | 2014-11-12 |
| PXD001045 | Biocathode metaproteomics | PRIDE | biofilm metagenome | QSTAR | Wang et al. (2014) | Dasha Leary | Dasha Leary | 2014-11-11 |
| PXD001090 | Interactors associated to Sas3-dependent NuA3 histone acetyltransferase complex | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | TripleTOF 5600 | Dataset with its publication pending | Luz Valero | Mercè Pamblanco Rodríguez | 2014-11-10 |
| PXD001089 | Interactors associated to Sas3-dependent NuA3 histone acetyltransferase complex | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | QSTAR | Dataset with its publication pending | Luz Valero | Mercè Pamblanco Rodríguez | 2014-11-10 |
| PXD001203 | The Q Exactive HF, a Benchtop Mass Spectrometer with a Pre-filter, High Performance Quadrupole and an Ultra-High Field Orbitrap Analyzer | PRIDE | Homo sapiens | Q Exactive | Scheltema et al. (2014) | Richard Scheltema | Matthias Mann | 2014-11-10 |
| PXD001074 | BDNF stimulation of protein synthesis in cortical neurons requires the eIF4E kinase Mnk1 | PRIDE | Mus musculus | LTQ Orbitrap Elite | Dataset with its publication pending | Harvey Johnston | Spiro D. Garbis | 2014-11-06 |
| PXD001165 | Hendra virus infection of bat (Pteropus alecto) and human cells | PRIDE | Pteropus alecto (Black flying fox), Homo sapiens , Hendra virus (isolate Horse/Autralia/Hendra/1994) | LTQ Orbitrap Velos | Dataset with its publication pending | David Matthews | David A Matthews | 2014-11-05 |
| PXD001423 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - secreted proteins of dexamethasone-treated inflammatory stimulated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001422 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - cytoplasmic proteins of dexamethasone-treated inflammatory stimulated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001421 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - nuclear proteins of dexamethasone-treated inflammatory stimulated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001420 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - secreted proteins of inflammatory stimulated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001419 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - cytoplasmic proteins of inflammatory stimulated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001418 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - nuclear proteins of inflammatory stimulated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001417 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - secreted proteins of untreated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001416 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - Cytoplasmic Proteins of Untreated Cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD001415 | Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - nuclear proteins of untreated cells | PRIDE | Homo sapiens | Q Exactive | Bileck et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-11-04 |
| PXD000971 | Proteomic Analysis of Livers from Fat-fed Mice Deficient in Either PKCδ or PKCɛ | PRIDE | Mus musculus | LTQ Orbitrap Velos | Liao et al. (2014) | Bing Qing Liao | Carsten Schmitz-Peiffer | 2014-11-04 |
| PXD001267 | Male infertility G. fossarum | PRIDE | Gammarus fossarum | LTQ Orbitrap Elite | Dataset with its publication pending | Jean ARMENGAUD | Jean Armengaud | 2014-11-04 |
| PXD001257 | Shotgun ecotoxicoproteomics of Daphnia pulex: biochemical effects of the anticancer drug tamoxifen | PRIDE | Daphnia pulex (Water flea) | LTQ Orbitrap | Borgatta et al. (2014) | Patrice Waridel | Manfredo Quadroni | 2014-10-31 |
| PXD001305 | Rapid and Deep Proteomes by Faster Sequencing on a Benchtop Quadrupole Ultra-High-Field Orbitrap Mass Spectrometer | PRIDE | Homo sapiens | Q Exactive HF; Q Exactive | Kelstrup et al. (2014) | Christian Kelstrup | Jesper V. Olsen | 2014-10-31 |
| PXD000964 | MS approach assessment and Mad1 phosphopeptide analysis | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Bauer et al. (2014) | Alexander Schmidt | Alexander Schmidt | 2014-10-31 |
| PXD001387 | Proteomics of Skin Proteins in Psoriasis | PRIDE | Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | Kathleen Lundberg | Mark R. Chance | 2014-10-30 |
| PXD001217 | Snake venom serine proteinases specificity mapping by proteomic identification of cleavage sites | PRIDE | Bothrops jararaca (Bothrops jajaraca) | LTQ Orbitrap | Dataset with its publication pending | Andre Zelanis | Solange M. T. Serrano | 2014-10-30 |
| PXD001108 | Listeria monocytogenes phosphoproteomics | PRIDE | Listeria monocytogenes EGD-e | LTQ Orbitrap | Dataset with its publication pending | Sandeep Misra | Celine Henry | 2014-10-29 |
| PXD001260 | Identification of miR-145 targets using SILAC | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Huang et al. (2014) | Akhilesh Pandey | Akhilesh Pandey | 2014-10-28 |
| PXD000473 | Alpha-1-Antitrypsin: A Novel Human High Temperature Requirement Protease A1 (HTRA1) Substrate in Human Placental Tissue | PRIDE | Homo sapiens | LTQ FT | Frochaux et al. (2014) | Violette Frochaux | | 2014-10-24 |
| PXD000906 | Deciphering changes to human platelet proteome and degradome during storage before transfusion | PRIDE | Homo sapiens | QSTAR | Prudova et al. (2014) | Anna Prudova | Christopher Mark Overall | 2014-10-24 |
| PXD001062 | Substrate Trapping Proteomics Reveals Targets of the βTrCP2/FBXW11 Ubiquitin Ligase | PRIDE | Homo sapiens | LTQ Orbitrap Velos; LTQ Orbitrap Elite | Kim et al. (2014) | Dennis Goldfarb | Michael Ben Major | 2014-10-24 |
| PXD001162 | Analysis low level Hsp90 proteome by SILAC in yeast | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Elite | Gopinath et al. (2014) | Scott Schuyler | Scott C. Schuyler | 2014-10-24 |
| PXD001403 | Proteome profiling of ovarian cancer and cirrhosis ascites | PRIDE | Homo sapiens | TripleTOF 5600 | Shender et al. (2014) | Georgij Arapidi | Georgij Arapidi | 2014-10-23 |
| PXD001402 | Proteome profiling of microvesicles, exosomes and supernatant from SKOV3 | PRIDE | Homo sapiens | TripleTOF 5600 | Shender et al. (2014) | Georgij Arapidi | Georgij Arapidi | 2014-10-23 |
| PXD001404 | Off-line high pH reversed-phase fractionation for in-depth phosphoproteomics | PRIDE | Mus musculus | Q Exactive | Batth, Francavilla & Olsen (2014) | Tanveer Batth | Jesper V. Olsen | 2014-10-23 |
| PXD000499 | miRNA-mediated regulation of hBC cell proteome | PRIDE | Homo sapiens | QSTAR | Nassa et al. (2014) | Tuula Nyman | | 2014-10-23 |
| PXD000788 | Human EGFR AP-MS project | PRIDE | Homo sapiens | Q Exactive | Tong, Taylor & Moran (2014) | Jiefei Tong | Mike Moran | 2014-10-23 |
| PXD001342 | Soluble lymph node proteome during anthrax infection in mice | PRIDE | Mus musculus | LTQ Orbitrap | Popova et al. (2014) | Serguei Popov | Serguei Popov | 2014-10-21 |
| PXD001252 | Arabidopsis thaliana proteomics/phosphoproteomics | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Dataset with its publication pending | Ines Lassowskat | Justin Lee | 2014-10-20 |
| PXD001200 | Hela-S3 ATPome | PRIDE | Homo sapiens | Q Exactive | Adachi et al. (2014) | Jun Adachi | Jun Adachi | 2014-10-20 |
| PXD001390 | Re-analysis of: ‘CSF proteome mapping: Human cerebrospinal fluid LC-MS/MS, Part 2’ (PXD000652) to demonstrate the ProteoAnnotator software for mapping identifications to Ensembl genomes | PRIDE | Homo sapiens | LTQ Orbitrap | Ghali et al. (2014) | Fawaz Ghali | Andy Jones | 2014-10-20 |
| PXD001042 | Proteogenomic analysis of Toxoplasma gondii (comparing genome releases 6 and 10) to demonstrate the performance of the ProteoAnnotator software | PRIDE | Toxoplasma gondii ME49 | LTQ Orbitrap | Ghali et al. (2014) | Fawaz Ghali | Andrew R. Jones | 2014-10-20 |
| PXD000867 | Cell type-resolved quantitative proteomics of mouse liver | PRIDE | Mus musculus | Q Exactive | Dataset with its publication pending | Mario Oroshi | Matthias Mann | 2014-10-20 |
| PXD001398 | Accessibilome of Human Glioblastoma | PRIDE | Homo sapiens , Mus musculus | Bruker Daltonics esquire series | Dataset with its publication pending | Andrei Turtoi | Vincent Castronovo | 2014-10-17 |
| PXD001373 | Major Proteomic Changes Associated with Amyloid Induced Biofilm Formation in Pseudomonas aeruginosa PAO1 | PRIDE | Pseudomonas aeruginosa PAO1 | Q Exactive | Herbst et al. (2014) | Florian-Alexander Herbst | Per Halkjær Nielsen | 2014-10-17 |
| PXD000078 | 'Life and death' of extracytoplasmic proteins | PRIDE | Bacillus subtilis (strain 168) | LTQ Orbitrap | Krishnappa et al. (2013) | Andreas Otto | | 2014-10-15 |
| PXD001281 | Proteome-wide identification of SUMO2 modification sites | PRIDE | Homo sapiens | Q Exactive | Tammsalu et al. (2014) | Triin Tammsalu | Ronald T. Hay | 2014-10-15 |
| PXD001094 | Phosphoproteomics study of N-terminal tyrosine sites of SLP-76 | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | QINQIN JI | Arthur Salomon | 2014-10-15 |
| PXD001033 | in-depth phosphoproteomic profiling of mouse microglia BV-2 cell line | PRIDE | Mus musculus | Q Exactive | Han et al. (2014) | Dohyun Han | Dohyun Han | 2014-10-15 |
| PXD000452 | Proteomic analysis in Giardia duodenalis yields insights into strain virulence and antigenic variation | PRIDE | Giardia intestinalis assemblage A | LTQ | Dataset with its publication pending | Samantha Emery | | 2014-10-14 |
| PXD000576 | Proteogenomics of Gammarus fossarum | PRIDE | Gammarus fossarum | LTQ Orbitrap | Trapp et al. (2014) | Jean ARMENGAUD | | 2014-10-13 |
| PXD001084 | Label-free LC-MSe in tissue and serum reveals protein networks underlying differences between benign and malignant serous ovarian tumors | PRIDE | Homo sapiens | Synapt G2 MS | Wegdam et al. (2014) | Gertjan Kramer | Johannes M.F.G. Aerts | 2014-10-13 |
| PXD000877 | In-depth proteomic analysis of carp (Cyprinus carpio L) spermatozoa | PRIDE | Cyprinus carpio (Common carp) | LTQ | Dietrich et al. (2014) | Mariola Dietrich | Mariola A. Dietrich | 2014-10-13 |
| PXD000961 | Integrated metagenomic and metaproteomic analyses of marine biofilm communities | PRIDE | biofilm metagenome | QSTAR | Dataset with its publication pending | Dasha Leary | Dasha Leary | 2014-10-13 |
| PXD000767 | Phosphoproteome of mouse testis | PRIDE | Mus musculus | LTQ Orbitrap | Qi et al. (2014) | zhou tao | Jiahao Sha | 2014-10-10 |
| PXD001339 | Huh-7 exosomes and HBV | PRIDE | Homo sapiens | Q Exactive | Zhao et al. (2014) | Jing Liu | Youhua Xie | 2014-10-09 |
| PXD001382 | ancient_maize_MS | MassIVE | Zea mays subsp. mays | LTQ | Dataset with its publication pending | Sunghee Woo | Lisandra Zepeda | 2014-10-06 |
| PXD001034 | Biomarkers for Cervical Cancer. iTRAQ Discovery. | PRIDE | Homo sapiens | Agilent instrument model | Boichenko et al. (2014) | Alexander Boichenko | Rainer Bischoff | 2014-10-06 |
| PXD001055 | Biomarkers for cervical cancer. Verfification. | PRIDE | Homo sapiens | Agilent instrument model | Boichenko et al. (2014) | Alexander Boichenko | Rainer Bischoff | 2014-10-06 |
| PXD001380 | Specific Non-Gluten Proteins of Wheat are Novel Target Antigens in Celiac Disease Humoral Response | MassIVE | Triticum aestivum, Specific Non-Gluten Proteins of Wheat are Novel Target Antigens in Celiac Disease Humoral Response | LTQ Orbitrap Elite | Dataset with its publication pending | William Vensel | Armin Alaedini, Columbia University Medical Center; 1130 Saint Nicholas Ave., 9th Floor; New York, NY 10032; Phone: 212-851-4582; Email: aa819@columbia.edu. | 2014-10-05 |
| PXD000554 | Convergence of Ubiquitylation and Phosphorylation Signaling in Rapamycin-Treated Yeast Cells | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | Q Exactive | Iesmantavicius, Weinert & Choudhary (2014) | Brian Weinert | Chunaram Choudhary | 2014-10-03 |
| PXD001076 | Quantitative phosphoproteomics of cytotoxic T cells to reveal Protein Kinase D 2 regulated networks | PRIDE | Mus musculus | LTQ Orbitrap Velos | Navarro et al. (2014) | Jens Hukelmann | Doreen Ann Cantrell | 2014-10-03 |
| PXD001216 | Analysis of differential expression patterns of mRNA and protein during cold- and de-acclimation in Arabidopsis | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap XL | Dataset with its publication pending | Kentaro Nakaminami | Motoaki Seki | 2014-10-02 |
| PXD000705 | Extending proteome coverage through an on-line 2D SCX-RP ultra-high pressure system | PRIDE | Homo sapiens | Q Exactive | Dataset with its publication pending | Fabio Marino | Albert J.R. Heck | 2014-09-30 |
| PXD001226 | Protein deacetylation affects acetate metabolism, motility and acid stress response in Escherichia coli | PRIDE | Escherichia coli | Q Exactive; LTQ Orbitrap Velos; LTQ Orbitrap Elite | Dataset with its publication pending | Harm Post | Manuel Cánovas | 2014-09-30 |
| PXD000786 | BMP1/Tolloid-like substrates by iTRAQ degradomics | PRIDE | Homo sapiens | QSTAR | Delolme et al. (2014) | Frederic DELOLME | Frederic Delolme | 2014-09-29 |
| PXD001266 | A transcriptional regulator Sll0794 regulates tolerance to biofuel ethanol in photosynthetic Synechocystis sp. PCC 6803 | PRIDE | Synechocystis sp. PCC 6803 | TripleTOF 5600 | Song et al. (2014) | Guangsheng Pei | Weiwen Zhang | 2014-09-26 |
| PXD000763 | Identification of inositol 1,4,5-trisphosphate-binding proteins by heparin-agarose affinity purification and LTQ ORBITRAP MS in Oryza sativa | PRIDE | Rice(O. sativa) | LTQ Orbitrap | Nie et al. (2014) | Shengcheng Han | Shengcheng Han | 2014-09-25 |
| PXD000886 | Bacillus cereus proteomics | PRIDE | Bacillus cereus (strain ATCC 14579 / DSM 31) | LTQ Orbitrap | Laouami et al. (2014) | Jean ARMENGAUD | Jean ARMENGAUD | 2014-09-25 |
| PXD001175 | Proteomic dissection of nanoparticle-containing vesicles reveals a major role for a macropinocytic-like uptake mechanism and multivesicular bodies during intracellular nanoparticle trafficking | PRIDE | Homo sapiens | Synapt G2-S HDMS | Hofmann et al. (2014) | Stefan Tenzer | Stefan Tenzer | 2014-09-25 |
| PXD000590 | In-depth protein profiling of mouse hippocampal postsynaptic density using data-independent acquisition proteomics | PRIDE | Mus musculus | Synapt MS | Distler et al. (2014) | Ute Distler | Ute Distler | 2014-09-25 |
| PXD001129 | Dissection of IL-2 and IL-15 signaling pathways | PRIDE | Homo sapiens | Q Exactive | Osinalde et al. (2014) | Nerea Osinalde | Nerea Osinalde | 2014-09-23 |
| PXD001328 | Proteome profiling of breast cancer biopsies reveals a wound healing signature of cancer-associated fibroblasts | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Groessl et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-09-23 |
| PXD001327 | Proteome profiling of breast cancer biopsies reveals a wound healing signature of cancer-associated fibroblasts | PRIDE | Homo sapiens | Q Exactive | Groessl et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-09-23 |
| PXD001326 | Proteome profiling of breast cancer biopsies reveals a wound healing signature of cancer-associated fibroblasts | PRIDE | Homo sapiens | Q Exactive | Groessl et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-09-23 |
| PXD001325 | Proteome profiling of breast cancer biopsies reveals a wound healing signature of cancer-associated fibroblasts | PRIDE | Homo sapiens | Q Exactive | Groessl et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-09-23 |
| PXD001324 | Proteome profiling of breast cancer biopsies reveals a wound healing signature of cancer-associated fibroblasts | PRIDE | Homo sapiens | Q Exactive | Groessl et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-09-23 |
| PXD001323 | Proteome profiling of breast cancer biopsies reveals a wound healing signature of cancer-associated fibroblasts | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Groessl et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-09-23 |
| PXD001311 | Proteome profiling of breast cancer biopsies reveals a wound healing signature of cancer-associated fibroblasts | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Groessl et al. (2014) | Christopher Gerner | Christopher Gerner | 2014-09-23 |
| PXD001022 | Proteomic analyses of embryogenic tissues in Picea balfouriana treated by 6-BAP | PRIDE | Picea likiangensis var. rubescens | TripleTOF 5600 | Li, Zhang & Wang (2014) | Qingfen Li | Junhui Wang | 2014-09-23 |
| PXD001063 | Proteomic analysis of cAMP-mediated signaling during differentiation of 3T3-L1 preadipocytes | PRIDE | Mus musculus | 4800 Proteomics Analyzer | Borkowski et al. (2014) | Kamil Borkowski | Karsten Kristiansen | 2014-09-22 |
| PXD000892 | Reproducible Automated Phosphopeptide Enrichment using Magnetic TiO2 and Ti-IMAC | PRIDE | Mus musculus | LTQ Orbitrap Velos; Q Exactive | Tape et al. (2014) | Christopher Tape | Claus Jørgensen | 2014-09-22 |
| PXD001253 | iTRAQ proteomics of non fibrotic carcinoma on Human Liver | PRIDE | Homo sapiens | LTQ Orbitrap | Negroni et al. (2014) | Luc NEGRONI | Eric Chevet | 2014-09-18 |
| PXD000279 | MaxLFQ label-free quantification algorithm benchmark datasets | PRIDE | Escherichia coli, Homo sapiens | LTQ Orbitrap; Q Exactive | Cox et al. (2014) | Mario Oroshi | | 2014-09-17 |
| PXD000661 | A ‘proteomic ruler’ for protein copy number and concentration estimation without spike-in standards | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap; LTQ Orbitrap Velos; Q Exactive | Wiśniewski et al. (2014) | Mario Oroshi | | 2014-09-16 |
| PXD000605 | The human plasma proteome before and after remote ischemic preconditioning | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Dataset with its publication pending | Marc Vaudel | | 2014-09-16 |
| PXD000333 | Human Primary T-cells Phospoproteomic WorkFlow | PRIDE | Homo sapiens | LTQ Orbitrap | Gallardo et al. (2014) | Ãscar Gallardo Román | | 2014-09-16 |
| PXD001006 | CPTAC System Suitability (CompRef) Study: Proteome, VU | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | Nathan Edwards | Daniel C. Liebler, Ph.D. | 2014-09-16 |
| PXD001000 | CPTAC System Suitability (CompRef) Study: Phosphoproteome, PNNL | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | Nathan Edwards | Richard D. Smith, Ph.D. | 2014-09-16 |
| PXD000966 | CPTAC System Suitability (CompRef) Study: Proteome, PNNL | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | Nathan Edwards | Richard D. Smith, Ph.D. | 2014-09-16 |
| PXD001310 | Polysome pellet digests | PRIDE | Homo sapiens | Agilent instrument model | Dataset with its publication pending | Eric Fang | Isabel Zaror | 2014-09-16 |
| PXD001127 | C-terminal Domain Small Phosphatase 1 and MAP kinase reciprocally control REST stability and neuronal differentiation. | PRIDE | Rattus norvegicus | LTQ | Nesti et al. (2014) | Phillip Wilmarth | Gail Mandel | 2014-09-15 |
| PXD001318 | GNPS Bacteria CB0028 associated to Acromyrmex sp. | MassIVE | Bacteria CB0028 | instrument model: Thermo Finnigan LTQ-FT-ICR | Dataset with its publication pending | Cristopher Boya | Marcelino Gutierrez / Pieter Dorrestein | 2014-09-12 |
| PXD001317 | GNPS Interaction between bacteria CB0028 and Escovopsis sp. (CBacro424) | MassIVE | Bacteria CB0028 and Escovopsis sp. | instrument model: Thermo Finnigan LTQ-FT-ICR | Dataset with its publication pending | Cristopher Boya | Marcelino Gutierrez / Pieter Dorrestein / Hermogenes Fernandez-Marin | 2014-09-12 |
| PXD001316 | GNPS Bacteria CB0028 associated to Acromyrmex sp. | MassIVE | Bacteria CB0028 associated to Acromyrmex sp. | instrument model: Thermo Finnigan LTQ-FT-ICR | Dataset with its publication pending | Cristopher Boya | Marcelino Gutierrez / Pieter Dorrestein | 2014-09-12 |
| PXD001315 | GNPS Escovopsis sp. (CBacro424) associated to nest of Acromyrmex sp. | MassIVE | Escovopsis sp. | instrument model: Thermo Finnigan LTQ-FT-ICR | Dataset with its publication pending | Cristopher Boya | Marcelino Gutierrez / Pieter Dorrestein | 2014-09-12 |
| PXD001314 | GNPS Streptomyces (CBR38) associated to Acromyrmex sp. | MassIVE | Streptomyces | instrument model: Thermo Finnigan LTQ-FT-ICR | Dataset with its publication pending | Cristopher Boya | Marcelino Gutierrez / Pieter Dorrestein | 2014-09-12 |
| PXD001313 | GNPS Streptomyces sp.(CBR53) associated to Acromyrmex sp. Direct infusion | MassIVE | Streptomyces sp. | micrOTOF-Q III | Dataset with its publication pending | Cristopher Boya | Gutierrez/Dorrestein | 2014-09-12 |
| PXD001312 | GNPS Octocoral-Associated Bacteria from Panama II | MassIVE | Bacteria associated to octocorals collected in Panama | LTQ FT; LTQ Orbitrap | Dataset with its publication pending | Daniel Torres-Menoza | Pieter C. Dorrestein / Marcelino Gutierrez | 2014-09-12 |
| PXD000872 | Forty-four novel protein-coding loci discovered using a PIT approach in rat male germ cells | PRIDE | Rattus norvegicus | LTQ Orbitrap XL | Chocu et al. (2014) | Sophie Chocu | Sophie Chocu | 2014-09-12 |
| PXD001248 | Determination of Supplier-To-Supplier and Lot-To-Lot Variability in Glycation of Recombinant Human Serum Albumin Expressed in Oryza sativa | PRIDE | Homo sapiens | Synapt MS | Dataset with its publication pending | Marybeth Creskey | Michael J.W. Johnston | 2014-09-12 |
| PXD001309 | GNPS Octocoral-Associated Bacteria from Panama | MassIVE | Bacteria associated to Octocorals collected in Panama | LTQ FT; LTQ Orbitrap | Dataset with its publication pending | Daniel Torres-Menoza | Pieter C. Dorrestein / Marcelino Gutierrez | 2014-09-11 |
| PXD001308 | Raj_nSR100_interactions_P36_V21_P105_V17 | MassIVE | Homo sapiens, Mus musculus | LTQ; TripleTOF 5600 | 0 | Gingras Lab | Anne-Claude Gingras | 2014-09-11 |
| PXD001080 | Entamoeba histolytica splicing/mRNP proteome | PRIDE | Entamoeba histolytica | LTQ Orbitrap | Valdés et al. (2014) | Robert Winkler | Dr. Jesus Valdes Flores | 2014-09-11 |
| PXD001304 | Trichoderma RUT C-30 secretome after growth on different cellulosic substrates | PRIDE | Trichoderma reesei RUT C-30 | Q Exactive | Peciulyte et al. (2014) | George Anasontzis | Lisbeth Olsson | 2014-09-11 |
| PXD001135 | Relative protein quantification in mouse hippocampal synaptosomes during aging series | PRIDE | Mus musculus | TOF/TOF 5800 | Vegh et al. (2014) | Pim van Nierop | Dr. Ronald van Kesteren | 2014-09-10 |
| PXD001292 | Comprehensive phosphoproteome analysis unravels the core signaling network that initiates the earliest synapse pathology in preclinical Alzheimer's disease brain | PRIDE | Mus musculus | TripleTOF 5600 | Tagawa et al. (2014) | Hidenori Homma | Hitoshi Okazawa | 2014-09-10 |
| PXD001182 | Metabolic changes in adaptation to biofilm growth by streptococcus pneumoniae | PRIDE | Streptococcus pneumoniae SP14-BS69 | Q-Tof ultima | Allan et al. (2014) | Paul Skipp | Dr Paul Skipp | 2014-09-10 |
| PXD000778 | Mouse SCN in LC-MSMS | PRIDE | Mus musculus | LTQ Orbitrap | Dataset with its publication pending | kerwin chiang | Daniel Figeys | 2014-09-10 |
| PXD000666 | Deep proteomic evaluation of primary and cell line motoneuron disease models delineates major differences in neuronal characteristics | PRIDE | Mus musculus | Q Exactive | Hornburg et al. (2014) | Mario Oroshi | Matthias Mann | 2014-09-09 |
| PXD001199 | Systematic identification of hypothetical bacteriophage proteins targeting key protein complexes of Pseudomonas aeruginosa | PRIDE | Pseudomonas aeruginosa PAO1 | LTQ; LTQ Orbitrap Velos | Van den Bossche et al. (2014) | Jean-Paul Noben | Prof Rob Lavigne | 2014-09-09 |
| PXD000935 | A normative study of the synovial fluid proteome from healthy porcine knee joints | PRIDE | Sus scrofa domesticus (domestic pig), Homo sapiens | Q Exactive; TripleTOF 5600 | Bennike et al. (2014) | Tue Bennike | Hanno Steen | 2014-09-09 |
| PXD001295 | GNPS - Streptomyces cattleya media screening | MassIVE | Streptomyces cattleya NRRL 8057 = DSM 46488 | 6520 Quadrupole Time-of-Flight LC/MS | Dataset with its publication pending | Ellis O'Neill | Bradley Moore | 2014-09-08 |
| PXD001294 | GNPS - Streptomyces CNB091, CNS615 and CNT302 on 8 media | MassIVE | Streptomyces sp. CNB091, Streptomyces sp. CNS615, Streptomyces sp. CNT302 | 6520 Quadrupole Time-of-Flight LC/MS | Dataset with its publication pending | Ellis O'Neill | Bradley Moore | 2014-09-08 |
| PXD001288 | GNPS - Streptomyces on A1, MS and R5 agar | MassIVE | Streptomyces sp. CNB091, Streptomyces sp. CNT302, Streptomyces sp. TAA204, Streptomyces sp. CNY228, Streptomyces sp. CNY243, Streptomyces sp. CNT372, Streptomyces sp. TAA486, Streptomyces sp. TAA040, Streptomyces sp. CNS335, Streptomyces sp. CNT318, Strep | 6520 Quadrupole Time-of-Flight LC/MS | Dataset with its publication pending | Ellis O'Neill | Bradley Moore | 2014-09-04 |
| PXD001287 | Gonzalez et al. MCP 2014 (PSM peptides); Cell Chemisty & Biology 2014 (N-AgrD Peptides) | MassIVE | Staphylococcus aureus strain TCH1516 USA300 | LTQ | Dataset with its publication pending | Max Cruesemann | David Gonzalez, Ph.D | 2014-09-04 |
| PXD001054 | Redox Proteome of Skeletal Muscle | PRIDE | Mus musculus | Q Exactive | McDonagh et al. (2014) | Brian McDonagh | Brian McDonagh | 2014-09-04 |
| PXD001061 | Uncovering Global SUMOylation Signaling Networks in a Site-Specific Manner | PRIDE | Homo sapiens | Q Exactive | Hendriks et al. (2014) | Ivo Hendriks | Alfred C.O. Vertegaal | 2014-09-04 |
| PXD000294 | Novel insights into the metabolic and biochemical underpinnings assisting dry-season survival in female malaria mosquitoes of the Anopheles gambiae complex | PRIDE | Anopheles gambiae str. PEST | AB SCIEX TOF/TOF T2D file | Hidalgo et al. (2014) | Hidalgo Kevin | | 2014-09-03 |
| PXD001277 | Mouse, Hippocampus, LC-MSMS | PRIDE | Mus musculus | LTQ Orbitrap | English et al. (2013) | Caitriona Scaife | David R. Cotter | 2014-09-02 |
| PXD000888 | Anoxia in Ralstonia eutropha H16 | PRIDE | Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) | LTQ Orbitrap | Kohlmann et al. (2014) | Andreas Otto | Andreas Otto | 2014-09-01 |
| PXD001251 | Identification of long-lived proteins retained in cells undergoing repeated asymmetric divisions | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap | Thayer et al. (2014) | Nathaniel Thayer | Daniel E. Gottschling | 2014-09-01 |
| PXD001003 | Comparative analysis of the adaptation of Staphylococcus aureus to internalization by different types of human non-professional phagocytic host cells | PRIDE | Staphylococcus aureus | Q Exactive | Surmann et al. (2014) | Maren Depke | Frank Schmidt | 2014-09-01 |
| PXD001174 | Un-conditioned commercial embryo culture media contain a large variety of non-declared proteins: a comprehensive proteomics analysis | PRIDE | Homo sapiens | TripleTOF 5600 | Dyrlund et al. (2014) | Thomas F. Dyrlund | Jan J. Enghild | 2014-09-01 |
| PXD001118 | Histione HCD and CID datasets for evaluation of search engines | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Yuan et al. (2014) | Zuo-Fei Yuan | Benjamin A. Garcia | 2014-09-01 |
| PXD000268 | AKT isoform specific signaling | PRIDE | Mus musculus | LTQ Orbitrap | Reinartz et al. (2014) | Michael Reinartz | | 2014-08-28 |
| PXD001258 | Correction To - Confetti: A Multi-protease Map of the HeLa Proteome for Comprehensive Proteomics | PRIDE | Homo sapiens | Q Exactive; LTQ Orbitrap Elite | Guo et al. (2014) | David Trudgian | Hamid Mirzaei | 2014-08-28 |
| PXD000874 | Cardiac myofilament isoforms | PRIDE | Rattus norvegicus | LTQ Orbitrap | Kooij et al. (2014) | Vidya Venkatraman | Dr. Jennifer E Van Eyk | 2014-08-28 |
| PXD001268 | Preterm birth CVF proteomics discovery | PRIDE | Homo sapiens | LTQ Orbitrap | Parry et al. (2014) | Suhong Zhang | Ian A Blair | 2014-08-28 |
| PXD000804 | Exploring potential virulence regulators in Paracoccidioides brasiliensis isolates of varying virulence through quantitative proteomics | PRIDE | Paracoccidioides brasiliensis (strain Pb18) | LTQ Orbitrap Velos | Castilho et al. (2014) | Alexandre Keiji Tashima | Alexandre Keiji Tashima | 2014-08-28 |
| PXD000552 | Deep and precise quantification of the mouse synaptosomal proteome reveals substantial remodeling during postnatal maturation | PRIDE | Mus musculus | LTQ Orbitrap Velos | Moczulska et al. (2014) | Michael Schutzbier | | 2014-08-28 |
| PXD001018 | Divergent Cysteines in FOXO3 and FOXO4 Mediate Paralog-Specific Redox Signaling | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Putker et al. (2014) | Harmjan Vos | Tobias Dansen | 2014-08-26 |
| PXD001040 | Divergent Cysteines in FOXO3 and FOXO4 Mediate Paralog-Specific Redox Signaling | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Putker et al. (2014) | Harmjan Vos | Tobias Dansen | 2014-08-26 |
| PXD000765 | Label-free mass spectrometry-based profiling of urinary proteins and metabolites for non-invasive diagnosis of idiopathic nephrotic syndrome in children | PRIDE | Homo sapiens | Synapt MS | Sedic et al. (2014) | Hans Vissers | Sandra Kraljevic Pavelic | 2014-08-26 |
| PXD001041 | Divergent Cysteines in FOXO3 and FOXO4 Mediate Paralog-Specific Redox Signaling | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Putker et al. (2014) | Harmjan Vos | Tobias Dansen | 2014-08-26 |
| PXD001254 | Qualitative and quantitative analysis of chicken semen | PRIDE | Gallus gallus | LTQ Orbitrap | Labas et al. (2014) | Labas Valerie | Valérie Labas | 2014-08-22 |
| PXD000693 | LC-MS/MS to identify proteins present in apoplastic fluid extracted from WT and ca1ca4 mutant Arabidopsis plants grown under low and high CO2 conditions | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap | Engineer et al. (2014) | Jeff Anderson | Scott C Peck | 2014-08-22 |
| PXD000692 | LC-MS/MS of apoplast proteins from Arabidopsis wild type and ca1ca4 mutant plants | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap | Engineer et al. (2014) | Jeff Anderson | Scott C Peck | 2014-08-22 |
| PXD000956 | Carbonic anhydrases, EPF2 peptide and a novel protease, CRSP, mediate CO2 control of stomatal development | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | TripleTOF 5600 | Engineer et al. (2014) | Majid Ghassemian | Majid Ghassemian | 2014-08-22 |
| PXD000572 | Hematopoietic Stem Cell (HSC) and Multipotent Progenitor (MPP1) quantitative proteomics | PRIDE | Mus musculus | LTQ Orbitrap Velos | Cabezas-Wallscheid et al. (2014) | Jenny Hansson | | 2014-08-21 |
| PXD000467 | Endogenous S-nitrosoproteome in colorectal cancer patients | PRIDE | Homo sapiens | Q-Tof Premier | Chen et al. (2014) | Yi-Ju Chen | | 2014-08-20 |
| PXD000380 | KMH2 control treatment | PRIDE | Homo sapiens | Q Exactive | Carvalho et al. (2014) | Rune Matthiesen | | 2014-08-20 |
| PXD001235 | Systematic evaluation of quantotypic peptides for targeted analysis of the human kinome (Worboys, et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Worboys et al. (2014) | Jonathan Worboys | Claus Jorgensen | 2014-08-19 |
| PXD001234 | Biomarkers for cervical cancer. Validation. (Alexander, et al. submitted) | PeptideAtlas | Homo sapiens | 6410 Triple Quadrupole LC/MS | no publication | Alexander Boichenko | Rainer Bischoff | 2014-08-19 |
| PXD001233 | SRM analysis of breast tumor samples (Waldemarson, et al) | PeptideAtlas | Homo sapiens | TSQ Vantage | Waldemarson, et al. (submitted) | Sofia Waldemarson | Peter James | 2014-08-19 |
| PXD001232 | Automated Phosphopeptide Enrichment SRM Analysis (Tape, et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Christopher Tape | Claus Jorgensen | 2014-08-19 |
| PXD001231 | Clinical validation of potential urinary biomarkers of UPJ obstruction in newborns (Lacroix et al.) | PeptideAtlas | Homo sapiens | QTRAP 5500 | Lacroix, et al. (submitted) | Anne Gonzalez de Peredo | B. Monsarrat | 2014-08-18 |
| PXD001230 | Effects of EGFR, EGFRvIII, PTEN on invasion-promoting proteins secreted by glioblastoma cells (Sangar et al. 2014) | PeptideAtlas | Homo sapiens | 6490 Triple Quadrupole LC/MS | Sangar et al. (2014) | Vineet Sangar | Dr Nathan D Price | 2014-08-18 |
| PXD001229 | Cell-Specific Labeling Enzymes For Analysis of Cell-Cell Communication in Continuous Co-Culture (Tape et al. 2014) | PeptideAtlas | Mycobacterium tuberculosis | TSQ Vantage | Tape et al. (2014) | Christopher Tape | Claus Jorgensen | 2014-08-18 |
| PXD001228 | DNA-repair enzymes measure before and after gamma-irradiation of breast cancer-derived cell lines (James, et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | no publication | Paolo Cifani | Peter James | 2014-08-18 |
| PXD000992 | Chicken uterine fluid protein description and quantification | PRIDE | Gallus gallus | LTQ Orbitrap Velos | Dataset with its publication pending | G HARICHAUX | Joel Gautron | 2014-08-18 |
| PXD000822 | Ram seminal plasma | PRIDE | Ovis aries | LTQ Orbitrap Velos | Soleilhavoup et al. (2014) | G HARICHAUX | Xavier Druart | 2014-08-18 |
| PXD001163 | Proteomic analysis of the Plasmodium male gamete reveals a key role for glycolysis in flagellar motility | PRIDE | Plasmodium sp. pBT9 | LTQ Orbitrap | Talman et al. (2014) | Ceereena Ubaida Mohien | Arthur M. Talman | 2014-08-18 |
| PXD000965 | N-glycosylation site occupancy in human prostaglandin H synthases expressed in Pichia pastoris | PRIDE | Homo sapiens , Komagataella pastoris (Pichia pastoris) | LTQ Orbitrap; Q Exactive | Kukk, Kasvandik & Samel (2014) | Sergo Kasvandik | Nigulas Samel | 2014-08-18 |
| PXD001227 | HPP Chr18: depleted plasma and HepG2 cells, SRM BIO (Ponomarenko et al. 2014) | PeptideAtlas | Homo sapiens | 6490 Triple Quadrupole LC/MS | Ponomarenko et al. (2014) | Aleksey Filimonov | Alexander Archakov | 2014-08-15 |
| PXD000649 | HPP Chr18: depleted plasma and HepG2 cells, SRM QC (Ponomarenko et al. 2014) | PeptideAtlas | Homo sapiens | 6490 Triple Quadrupole LC/MS | Ponomarenko et al. (2014) | Aleksey Filimonov | Alexander Archakov | 2014-08-15 |
| PXD000167 | HPP Chr18: depleted plasma and HepG2 cells, SRM scouting (Ponomarenko et al. 2014) | PeptideAtlas | Homo sapiens | 6490 Triple Quadrupole LC/MS | Ponomarenko et al. (2014) | Aleksey Filimonov | Alexander Archakov | 2014-08-15 |
| PXD000103 | Label-sparse (Chang et al. 2014) | PeptideAtlas | Mus musculus | 4000 QTRAP | Chang et al. (2014) | Eduard Sabido | Olga Vitek | 2014-08-15 |
| PXD000311 | Analysis of mouse hippocampus membrane proteome by gel-based LC/MS | PRIDE | Mus musculus | instrument model: Thermo Orbitrap Velos Pro | Heo et al. (2014) | Gert Lubec | | 2014-08-15 |
| PXD000862 | Metaproteomics: Optimization and evaluation of protein extraction from activated sludge | PRIDE | environmental samples | Q Exactive | Hansen et al. (2014) | Florian-Alexander Herbst | Per Halkjær Nielsen | 2014-08-15 |
| PXD001220 | Characterization of native protein complexes and protein isoform variation using size-fractionation-based quantitative proteomics. | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Kirkwood et al. (2013) | Vackar Afzal | Prof Angus Lamond | 2014-08-14 |
| PXD000999 | DeMix:efficient identification of co-fragmented peptides | PRIDE | Homo sapiens | Q Exactive | Zhang et al. (2014) | Bo Zhang | Roman A. Zubarev | 2014-08-14 |
| PXD001167 | Quantitative Histone Acetylation | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Velos | Cieniewicz et al. (2014) | Alan Tackett | Alan J Tackett | 2014-08-14 |
| PXD001019 | Quantitative Proteomic Analysis Reveals Posttranslational Responses to Aneuploidy in Yeast | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap; LTQ Orbitrap Velos | Dephoure et al. (2014) | Noah Dephoure | Noah Dephoure | 2014-08-14 |
| PXD001156 | YLR455 affinity purification | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ | Gilbert et al. (2014) | Alan Tackett | Alan J. Tackett | 2014-08-14 |
| PXD000770 | Cellular and proteomics analysis of the endomembrane system from the unicellular Entamoeba histolytica | PRIDE | Entamoeba histolytica HM-1:IMSS | LTQ Orbitrap Velos | Perdomo et al. (2014) | gagan jhingan | Nancy Guillen | 2014-08-13 |
| PXD000893 | secretome study for human hepatic model during entamoeba invasion | PRIDE | Homo sapiens , Entamoeba histolytica HM-1:IMSS-A, Bos taurus | LTQ Orbitrap Velos | Dataset with its publication pending | gagan jhingan | Nancy Guillen | 2014-08-13 |
| PXD001058 | Unravelling the proteomic profile of rice meiocytes during early meiosis | PRIDE | Rice(O. sativa) | LTQ Orbitrap Velos | Collado-Romero, Alós & Prieto (2014) | Enriqueta Alos | Pilar Prieto | 2014-08-13 |
| PXD000750 | Metastatic pancreatic cancer signaling | PRIDE | Homo sapiens | LTQ Orbitrap XL; LTQ Orbitrap Elite | Kim et al. (2014) | Akhilesh Pandey | Min-Sik Kim | 2014-08-13 |
| PXD000759 | Phosphopeptide enrichment on synthetic libraries and HeLa cells digest | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Matheron et al. (2014) | Lucrece Matheron | Albert Heck | 2014-08-11 |
| PXD001009 | Deletion of Jagunal homolog 1 (Jagn1) impairs neutrophil mediated responses against Candida albicans | PRIDE | Mus musculus | Q Exactive | Dataset with its publication pending | Gerhard Duernberger | Josef Penninger | 2014-08-11 |
| PXD001008 | Deletion of Jagunal homolog 1 (Jagn1) impairs neutrophil mediated responses against Candida albicans | PRIDE | Mus musculus | Q Exactive | Dataset with its publication pending | Gerhard Duernberger | Josef Penninger | 2014-08-11 |
| PXD000773 | SILAC-based Quantitative Proteomic Analysis of Secretome between Activated and Reverted Hepatic Stellate Cells | PRIDE | Homo sapiens | LTQ FT | Zhang et al. (2014) | Hongyu Zhang | Ying Jiang | 2014-08-11 |
| PXD000640 | Analysis of the interactome of RPS19 mutants | PRIDE | Homo sapiens | 6340 Ion Trap LC/MS | Caterino et al. (2014) | Marianna Caterino | Margherita Ruoppolo | 2014-08-11 |
| PXD001026 | Systematic evaluation of quantotypic peptides for targeted analysis of the human kinome | PRIDE | Homo sapiens | LTQ Orbitrap Velos; TSQ Vantage | Worboys et al. (2014) | Jonathan Worboys | Claus Jørgensen | 2014-08-08 |
| PXD001099 | Piezo1 integration of vascular architecture with physiological force LC-MSMS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Li et al. (2014) | David Beech | David J. Beech | 2014-08-08 |
| PXD001120 | Adenovirus particles SILAC analysis of different batches and mutant virus | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Alqahtani et al. (2014) | David Matthews | David Matthews | 2014-08-08 |
| PXD001211 | Circadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver. | PRIDE | Mus musculus | LTQ Orbitrap Velos | Mauvoisin et al. (2014) | Manfredo Quadroni | Frederic Gachon | 2014-08-08 |
| PXD001032 | SIK2 phosphorylation in response to glucagon or insulin in murine hepatocytes | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap; Q TRAP | Patel et al. (2014) | David Campbell | Kei Sakamoto | 2014-08-08 |
| PXD000957 | Proteomic analysis of human vitreous humor | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Murthy et al. (2014) | Akhilesh Pandey | Akhilesh Pandey | 2014-08-08 |
| PXD000954 | The Pan-Human Library: A repository of assays to quantify 10 000 proteins by SWATH-MS / SWATH-MS validation data | PRIDE | Homo sapiens | TripleTOF 5600 | Dataset with its publication pending | George Rosenberger | Ruedi Aebersold | 2014-08-08 |
| PXD000953 | The Pan-Human Library: A repository of assays to quantify 10 000 proteins by SWATH-MS | PRIDE | Homo sapiens | TripleTOF 5600 | Dataset with its publication pending | George Rosenberger | Ruedi Aebersold | 2014-08-08 |
| PXD000593 | Human CDK Family | PRIDE | Homo sapiens | LTQ Orbitrap | Xu et al. (2014) | Xu Li | Junjie Chen | 2014-08-08 |
| PXD000748 | LACI Plasma Microvesicle Biomarker | PRIDE | Homo sapiens | QSTAR | Datta, Chen & Sze (2014) | Siu Kwan Sze | Newman Sze | 2014-08-07 |
| PXD000513 | Photo-cross-linking mass spectrometry for single amino acid assignment of RNA-binding sites in RNA-binding proteins | PRIDE | Homo sapiens , Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Velos | Dataset with its publication pending | Timo Sachsenberg | Oliver Kohlbacher | 2014-08-07 |
| PXD000612 | Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling | PRIDE | Homo sapiens | Q Exactive | Sharma et al. (2014) | Mario Oroshi | Matthias Mann | 2014-08-06 |
| PXD000287 | Comparative analysis of chicken seminal plasma | PRIDE | Gallus gallus | LTQ Orbitrap Velos | Labas et al. (2014) | Labas Valerie | | 2014-08-06 |
| PXD000677 | 14-3-3 affinity capture to identify new targets of 14-3-3 signaling during dsRNA-stimulation in human keratinocytes. | PRIDE | Homo sapiens | QSTAR | Ohman et al. (2014) | Tuula Nyman | Tuula A Nyman | 2014-08-05 |
| PXD001185 | Colonization state influences the hemocyte proteome in a beneficial squid-vibrio symbiosis | PRIDE | Euprymna scolopes (Hawaiian bobtail squid) | Q Exactive; TripleTOF 5600 | Schleicher et al. (2014) | Tyler Schleicher | Spencer V. Nyholm | 2014-08-05 |
| PXD000657 | CSF proteome mapping: Human plasma LC-MS/MS, Part 7 | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Guldbrandsen et al. (2014) | Astrid Guldbrandsen | | 2014-08-05 |
| PXD000656 | CSF proteome mapping: Human Plasma LC-MS/MS, Part 6 | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Guldbrandsen et al. (2014) | Astrid Guldbrandsen | | 2014-08-04 |
| PXD000655 | CSF proteome mapping: Human cerebrospinal fluid LC-MS/MS, Part 5 | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Guldbrandsen et al. (2014) | Astrid Guldbrandsen | | 2014-08-04 |
| PXD000654 | CSF proteome mapping: Human cerebrospinal fluid LC-MS/MS, Part 4 | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Guldbrandsen et al. (2014) | Astrid Guldbrandsen | | 2014-08-04 |
| PXD000653 | CSF proteome mapping: Human cerebrospinal fluid LC-MS/MS, Part 3 | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Guldbrandsen et al. (2014) | Astrid Guldbrandsen | | 2014-08-04 |
| PXD000652 | CSF proteome mapping: Human cerebrospinal fluid LC-MS/MS, Part 2 | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Guldbrandsen et al. (2014) | Astrid Guldbrandsen | | 2014-08-04 |
| PXD000651 | CSF proteome mapping: Human cerebrospinal fluid LC-MS/MS, Part 1 | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Guldbrandsen et al. (2014) | Astrid Guldbrandsen | | 2014-08-04 |
| PXD000154 | MSe_Bsubtilis168 | PRIDE | Bacillus subtilis (strain 168) | Synapt MS | Muntel et al. (2014) | Sandra Maass | | 2014-08-04 |
| PXD000624 | SILAC analysis of PDGF-treated primary bladder smooth muscle cells | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Yang et al. (2014) | Wei Yang | | 2014-08-04 |
| PXD001190 | Similar is not the same: Differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi | PRIDE | Aspergillus nidulans TN02A3, Trichoderma reesei QM9414, Aspergillus niger, Fusarium graminearum GZ3639, Magnaporthe oryzae B157 | LTQ Orbitrap Elite | Klaubauf et al. (2014) | Harm Post | Ronald Peter de Vries | 2014-08-01 |
| PXD000858 | SILAC-Based Strategy for Proteome-Wide Analysis of Protein-Ligand Binding Interactions (Part 1/2) | PRIDE | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | 6520 Quadrupole Time-of-Flight LC/MS | Tran, Adhikari & Fitzgerald (2014) | Jagat Adhikari | Michael C. Fitzgerald | 2014-07-31 |
| PXD000860 | SILAC-Based Strategy for Proteome-Wide Analysis of Protein-Ligand Binding Interactions (Part 2/2) | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap | Tran, Adhikari & Fitzgerald (2014) | Jagat Adhikari | Michael C. Fitzgerald | 2014-07-31 |
| PXD000987 | Membrane proteomis profile along human colon | PRIDE | Homo sapiens | LTQ Orbitrap | van der Post & Hansson (2014) | S.S van der Post | Gunnar C Hansson | 2014-07-31 |
| PXD001072 | Characterization of the surfaceome of the metal-reducing bacterium Desulfotomaculum reducens | PRIDE | Desulfotomaculum reducens (strain MI-1) | Q Exactive | Dalla Vecchia et al. (2014) | Romain Hamelin | Marc Moniatte | 2014-07-31 |
| PXD000897 | Protein Redox Dynamics During Light-to-Dark Transitions in Cyanobacteria and Impacts Due to Nutrient Limitation | PRIDE | Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) | LTQ Orbitrap; LTQ Orbitrap Velos | Ansong et al. (2014) | Matthew Monroe | Richard D. Smith | 2014-07-31 |
| PXD001107 | Detection of Dichlorvos Aducts in Hepatocyte Cell Line LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Bui-Nguyen et al. (2014) | William Dennis | John A Lewis | 2014-07-31 |
| PXD000758 | Identification of Drosophila centromere associated proteins | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap | Barth et al. (2014) | Andreas Thomae | Axel Imhof | 2014-07-31 |
| PXD000801 | Effects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 4 | PRIDE | Campylobacter jejuni subsp. jejuni | LTQ Orbitrap Velos | Clark et al. (2014) | Clifford Clark | Garrett R. Westmacott | 2014-07-31 |
| PXD000800 | Effects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 3 | PRIDE | Campylobacter jejuni subsp. jejuni | LTQ Orbitrap Velos | Clark et al. (2014) | Clifford Clark | Garrett R. Westmacott | 2014-07-31 |
| PXD000799 | Effects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 2 | PRIDE | Campylobacter jejuni 10186 | LTQ Orbitrap Velos | Clark et al. (2014) | Clifford Clark | Garret R. Westmacott | 2014-07-31 |
| PXD000798 | Effects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 1 | PRIDE | Campylobacter jejuni 10227 | LTQ Orbitrap Velos | Clark et al. (2014) | Clifford Clark | Garrett R. Westmacott | 2014-07-31 |
| PXD000923 | Rice Pistil LC-MSMS | PRIDE | Rice(O. sativa) | TripleTOF 5600 | Wang et al. (2014) | Kun Wang | wangkun | 2014-07-31 |
| PXD001187 | Influence of digestion protocol in Protein Quantitation | PRIDE | Escherichia coli | LTQ Orbitrap Velos | Chiva, Ortega & Sabidó (2014) | Cristina Chiva | Eduard Sabidó | 2014-07-30 |
| PXD000249 | DNA repair in Mycoplasma gallisepticum | PRIDE | Mycoplasma gallisepticum | TripleTOF 5600 | Gorbachev et al. (2013) | Dmitry Alexeev | Dmitry Ischenko | 2014-07-30 |
| PXD001049 | Nitrated protein profile of rat hypoxic brain | PRIDE | Rattus norvegicus | 4800 Proteomics Analyzer | Peinado et al. (2014) | Santos Blanco | Maria Angeles Peinado | 2014-07-30 |
| PXD000459 | Identification of SUMO sites by LC-MSMS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Impens et al. (2014) | Francis Impens | | 2014-07-29 |
| PXD001029 | Species identification of archaeological skin objects from Danish bogs | PRIDE | Capra hircus , Bos taurus , Ovis aries | Q Exactive; LTQ Orbitrap Velos | Brandt et al. (2014) | Enrico Cappellini | Enrico Cappellini | 2014-07-29 |
| PXD000909 | Silkworm testis LC-MS/MS | PRIDE | Bombyx mori (Silk moth) | Q Exactive | Zhang et al. (2014) | Yan Zhang | Ping Zhao | 2014-07-28 |
| PXD000349 | 2D-DIGE global protein profiling of alcohol-dependent mouse brain | PRIDE | Mus musculus | instrument model: AB SCIEX TOF/TOF™ 5800 System | Gorini, Roberts & Mayfield (2013) | Giorgio Gorini | | 2014-07-28 |
| PXD000813 | Sex-partitioning of the Plasmodium falciparum gametocyte proteome provides insight into falciparum-specific cell biology | PRIDE | Homo sapiens , Plasmodium falciparum | 6520 Quadrupole Time-of-Flight LC/MS | Tao et al. (2014) | Dingyin Tao | Rhoel R Dinglasan | 2014-07-25 |
| PXD000902 | Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs | PRIDE | Xenopus laevis (African clawed frog) | LTQ Orbitrap Velos; Q Exactive | Smits et al. (2014) | A.H. Smits | Michiel Vermeulen | 2014-07-23 |
| PXD000764 | Discovery of cerebrospinal fluid new biomarkers for meningitis in children | PRIDE | Homo sapiens , Streptococcus pneumoniae (strain ATCC BAA-255 / R6) | LTQ Orbitrap Velos | Ternent et al. (2014) | Da Qi | Rob Beynon | 2014-07-22 |
| PXD001157 | Oligosaccharide Substrate Preferences of Human Extracellular Sulfatase Sulf2 | PRIDE | Bos taurus | 6520 Quadrupole Time-of-Flight LC/MS | Huang et al. (2014) | Yu Huang | Joseph Zaia | 2014-07-22 |
| PXD000756 | Comparative analysis of the secretome from a model filarial nematode (Litomosoides sigmodontis) reveals maximal diversity in gravid female parasites | PRIDE | Litomosoides sigmodontis (Filarial nematode worm) | LTQ Orbitrap | Armstrong et al. (2014) | Stuart Armstrong | Benjamin Makepeace | 2014-07-22 |
| PXD000594 | An investigation into the protein composition of the Glossina morsitans morsitans peritrophic matrix | PRIDE | Glossina morsitans | instrument model: LTQ; LTQ | Rose et al. (2014) | Stuart Armstrong | | 2014-07-22 |
| PXD000534 | Identification of novel biomarker candidates for the immunohistochemical diagnosis of cholangiocellular carcinoma - LC-MS Part | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Padden et al. (2014) | Julian Uszkoreit | | 2014-07-22 |
| PXD000471 | Characterization of functional reprogramming during osteoclast development using quantitative proteomics and mRNA profiling | PRIDE | Mus musculus | LTQ Orbitrap Velos | An et al. (2014) | Aleksandra Nita-Lazar | | 2014-07-22 |
| PXD000990 | Cocaine and Environmental Enrichment Proteomics Study of Rat Nucleus Accumbens | PRIDE | Rattus norvegicus | LTQ Orbitrap Velos | Lichti et al. (2014) | Cheryl Lichti | Thomas Green | 2014-07-22 |
| PXD000881 | Identification of Drosophila USP2 partners | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap Velos | Engel et al. (2014) | Yohann Couté | Christophe Bruley | 2014-07-18 |
| PXD000357 | Identification of ERK1 direct substrates using stable isotope labeled kinase assay linked phosphoproteomics | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Xue et al. (2014) | Liang Xue | | 2014-07-17 |
| PXD001073 | Metallothionein-like peptides of Russula atropurpurea | PRIDE | Russula atropurpurea | maXis | Leonhardt et al. (2014) | Jiri Santrucek | Pavel Kotrba | 2014-07-16 |
| PXD001025 | Basement Membranes from Human Retinal Blood Vessels, Inner Limiting Membranes, and Lens Capsules | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Uechi et al. (2014) | Guy Uechi | Guy T. Uechi | 2014-07-16 |
| PXD000931 | Disclosure of selective advantages in the “modern” sublineage of the Mycobacterium tuberculosis Beijing genotype family by quantitative proteomics. | PRIDE | Mycobacterium tuberculosis C | LTQ FT | de Keijzer et al. (2014) | Jeroen de Keijzer | Peter van Veelen | 2014-07-16 |
| PXD000364 | A magnetic immunoenrichment strategy for N-terminal-oriented proteogenomics applied to the marine bacterium Roseobacter denitrificans | PRIDE | Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) | LTQ Orbitrap | Bland, Bellanger & Armengaud (2014) | Jean ARMENGAUD | | 2014-07-16 |
| PXD000441 | Human AML cell lines LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap Velos; LTQ Orbitrap Elite | Aasebø et al. (2014) | Elise Aasebø | Frode Steingrimsen Berven | 2014-07-15 |
| PXD000683 | Genomics and Proteomics Provide New Insight into the Commensal and Pathogenic Lifestyles of Bovine and Human-associated Staphylococcus epidermidis | PRIDE | Staphylococcus epidermidis | QSTAR | Savijoki et al. (2014) | Pia Siljamäki | Tuula A Nyman | 2014-07-15 |
| PXD000744 | CNB Lipid Rafts reAnalysis. | PRIDE | Homo sapiens | Bruker Daltonics esquire series | Dataset with its publication pending | J. Alberto Medina-Aunon | J.P. Albar | 2014-07-14 |
| PXD000662 | Proteomic profiling and characterization of differential allergens in the nematodes Anisakis simplex sensu stricto and A. pegreffii | PRIDE | Anisakis simplex | instrument model: 4800 Plus MALDI TOF/TOF | Arcos et al. (2014) | Sergio Ciordia Higuera | | 2014-07-11 |
| PXD000396 | Development and performance evaluation of an ultra-low flow nano liquid chromatography-tandem mass spectrometry set-up | PRIDE | Homo sapiens | Q Exactive | Köcher et al. (2014) | thomas koecher | | 2014-07-10 |
| PXD000905 | Proteomic signatures of the Pacific oyster Crassostrea gigas cellular response to Ostreid herpes virus -1 (OsHV-1) infection: a metabolic response. | PRIDE | Crassostrea gigas (Pacific oyster) (Crassostrea angulata) | Bruker Daltonics HCT Series | Corporeau et al. (2014) | E Com | Charles Pineau | 2014-07-10 |
| PXD000119 | Nano HPLC Chip Ion Trap MS/MS of human pancreatic cancer cells | PRIDE | Homo sapiens | instrument model: nano HPLC Chip Ion Trap | Brandi et al. (2013) | Daniela Cecconi | | 2014-07-10 |
| PXD001038 | Differentially embedded glioblastoma tumor protein quantitation | PRIDE | Homo sapiens | TripleTOF 5600 | Dataset with its publication pending | Hannah Johnson | Forest M White | 2014-07-09 |
| PXD000161 | Protemoic analysis of Yeast during retenostat cultivation | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | instrument model: Q-exactive; Q Exactive | Dataset with its publication pending | N. Binai | | 2014-07-09 |
| PXD000384 | V5-tagged LIMD1 in HEK293 cells with or without JNK2 activation | PRIDE | Homo sapiens | instrument model: LTQ; LTQ | Sun & Irvine (2013) | Gongping Sun | | 2014-07-09 |
| PXD000722 | pTyr-CoIP HP/AGS | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Christian Koehler | Bernd Thiede | 2014-07-09 |
| PXD000253 | Quantitative Mass Spectrometry Reveals Plasticity of Metabolic Networks in Mycobacterium smegmatis | PRIDE | Mycobacterium smegmatis (strain ATCC 700084 / mc155) | LTQ Orbitrap Elite | Chopra et al. (2014) | Romain Hamelin | Moniatte | 2014-07-09 |
| PXD000670 | Phosphoproteomics combined with quantitative 14-3-3-affinity capture identifies SIRT1 and RAI as new regulators of cytosolic dsRNA-induced innate immune response | PRIDE | Homo sapiens | QSTAR | Ohman et al. (2014) | Tuula Nyman | Tuula Nyman | 2014-07-08 |
| PXD000978 | Proteomic profiling of MDC1A muscle using TMT quantitation, Bruno Oliveira | PRIDE | Mus musculus | LTQ Orbitrap | Menezes de Oliveira et al. (2014) | Carina Sihlbom | Carina Sihlbom | 2014-07-08 |
| PXD000710 | Proteogenomics of Venturia pirina | PRIDE | Venturia pirina | ultraflex; Bruker Daltonics HCT Series; LTQ Orbitrap Elite | Cooke et al. (2014) | Ira Cooke | Suresh Mathivanan | 2014-07-02 |
| PXD001001 | A substrate trapping approach identifies proteins regulated by reversible S-nitrosylation | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap | Ben-Lulu et al. (2014) | Tamar Ziv | Moran Benhar | 2014-07-02 |
| PXD001020 | Redox-state of pentraxin 3 as a novel biomarker for resolution of inflammation and survival in sepsis | PRIDE | Mus musculus | LTQ Orbitrap | Cuello et al. (2014) | Xiaoke Yin | Manuel Mayr | 2014-07-01 |
| PXD000496 | Proteomics of TGF beta signaling | PRIDE | Homo sapiens | Q Exactive | Dataset with its publication pending | Mario Oroshi | | 2014-07-01 |
| PXD000216 | Proteome Changes Induced by Imatinib and Novel Imatinib Derivatives in K562 Human Chronic Myeloid Leukemia Cells | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Dataset with its publication pending | Pieter-Jan De Bock | | 2014-06-30 |
| PXD000875 | The membrane proteome of Medicago truncatula roots displays qualitative and quantitative changes in response to arbuscular mycorrhizal symbiosis | PRIDE | Medicago truncatula var. truncatula | LTQ Orbitrap | Abdallah et al. (2014) | cosette abdallah | Ghislaine Recorbet | 2014-06-30 |
| PXD000577 | PhosFox: a software tool for peptide-level processing of LC-MS/MS-based phosphoproteomic data | PRIDE | Homo sapiens | QSTAR | Söderholm et al. (2014) | Tuula Nyman | | 2014-06-30 |
| PXD000536 | HCMV-NEC analysis | PRIDE | Homo sapiens , Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) | LTQ Orbitrap Velos | Milbradt et al. (2014) | Yohann Couté | Christophe Bruley | 2014-06-30 |
| PXD001092 | Extracellular Matrix Signatures of Human Primary Metastatic Colon Cancers and their Liver Metastases | MassIVE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Karl Clauser | Steven A. Carr | 2014-06-27 |
| PXD001053 | Rescue of disrupted mechanotransduction as a new therapeutic strategy in human dilated cardiomyopathy | PRIDE | Mus musculus | LTQ Orbitrap | Dataset with its publication pending | Jason Maynes | Jason T Maynes | 2014-06-26 |
| PXD000015 | Esca proper and apoplexy on trunk wood of Vitis vinifera L. cv.Chardonnay | PRIDE | Vitis | Bruker Daltonics amaZon series; instrument model: Bruker Ion Trap amaZon | Dataset with its publication pending | Tchilabalo Dilezitoko ALAYI | | 2014-06-25 |
| PXD000435 | Potato secretome during Phytophthora infection | PRIDE | Solanum tuberosum | instrument model: LTQ Orbitrap XL; LTQ Orbitrap XL | Dataset with its publication pending | Fredrik Levander | | 2014-06-24 |
| PXD000439 | Reconstructing targetable pathways in lung cancer by integrating diverse omics data | PRIDE | Homo sapiens | LTQ Velos | Balbin et al. (2013) | Damian Fermin | | 2014-06-24 |
| PXD001077 | PeptideShaker | PRIDE | Pyrococcus furiosus | LTQ Orbitrap Velos | Vaudel et al. (2012) | Marc Vaudel | Lennart Martens | 2014-06-24 |
| PXD000502 | Mouse cerebellum (phospho)proteome LC-MSMS | PRIDE | Mus musculus | Q Exactive; LTQ Orbitrap Elite | Corradini et al. (2014) | Eleonora Corradini | | 2014-06-17 |
| PXD001030 | Proteomic analysis of proteins related to rice grain chalkiness using iTRAQ based on a notched-belly mutant with white-belly | PRIDE | Rice(O. sativa) | TripleTOF 5600 | Lin et al. (2014) | Zhaomiao Lin | Zhenghui Liu | 2014-06-17 |
| PXD000629 | Proteomics analysis of B. bigemina | PRIDE | Babesia bigemina, Babesia sp. | LTQ Orbitrap; instrument model: LTQ Orbitrap | Jackson et al. (2014) | Dong Xia | | 2014-06-16 |
| PXD000783 | The Phophoproteome of Chlamydomonas reinhardtii | PRIDE | Chlamydomonas reinhardtii CC3269 | LTQ Orbitrap Velos; TripleTOF 5600 | Wang et al. (2014) | William Slade | Leslie M. Hicks | 2014-06-11 |
| PXD000404 | Comparative Proteome Profiling of Bovine and Human Staphylococcus epidermidis Strains to Search for Cell-surface Bound Factors with Plausible Roles in Virulence or Adaptation | PRIDE | Staphylococcus epidermidis | QSTAR | Siljamäki et al. (2014) | Pia Siljamäki | Tuula A Nyman | 2014-06-10 |
| PXD001047 | Additional precursor purification in isobaric mass tagging experiments by traveling wave ion mobility separation (TWIMS). | PRIDE | Homo sapiens , Saccharomyces cerevisiae (Baker's yeast) | Synapt MS | Shliaha et al. (2014) | Pavel Shliaha | Kathryn Susan Lilley | 2014-06-10 |
| PXD000362 | Systems Biology Proteomic Analysis of Cerebral Cavernous Malformation | PRIDE | Homo sapiens | LTQ Orbitrap | Edelmann et al. (2014) | Kevin Knagge | | 2014-06-09 |
| PXD000817 | Phosphoproteome profiles of the phytopathogenic fungi Alternaria brassicicola and Botrytis cinerea | PRIDE | Alternaria brassicae, Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea) | LTQ | Davanture et al. (2014) | Marlène Davanture | Michel Zivy | 2014-06-09 |
| PXD000186 | AtT 20 endogenous peptides | PRIDE | Mus musculus | LTQ Orbitrap | Hayakawa et al. (2013) | Eisuke Hayakawa | | 2014-06-09 |
| PXD000591 | Human Adenovirus 5 (HAdV5), LC-MSMS | PRIDE | Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5) | LTQ Orbitrap; Q Exactive | Benevento et al. (2014) | Marco Benevento | Albert J.R. Heck | 2014-06-09 |
| PXD000761 | Phosphoproteome profiling of toll-like receptor response to different ligand stimulation in macrophages identifies differences in global phosphorylation dynamics | PRIDE | Mus musculus | LTQ Orbitrap Velos | Sjoelund, Smelkinson & Nita-Lazar (2014) | Aleksandra Nita-Lazar | Aleksandra Nita-Lazar | 2014-06-09 |
| PXD000948 | Macro-porous Reversed Phase Separation of Proteins Combined with Reversed Phase Separation of Phosphopeptides and Tandem Mass Spectrometry for Profiling the Phosphoproteome of MDA-MB-231 cells | PRIDE | Homo sapiens | Waters instrument model | Ye & Li (2014) | Xiaoxia Ye | Xiaoxia Ye | 2014-06-06 |
| PXD000878 | Phosphoproteomics of MuSK Signaling | PRIDE | Mus musculus | LTQ Orbitrap Velos | Duernberger et al. (2014) | Gerhard Duernberger | Karl Mechtler | 2014-06-05 |
| PXD000558 | Phosphoproteomics of MuSK Signaling | PRIDE | Mus musculus | LTQ Orbitrap Velos | Duernberger et al. (2014) | Gerhard Duernberger | Karl Mechtler | 2014-06-05 |
| PXD000501 | In-depth proteomic analysis of secretome and whole cells of mouse astrocyte | PRIDE | Mus musculus | Q Exactive | Han et al. (2014) | Dohyun Han | | 2014-06-05 |
| PXD000548 | Proteome analyses of the human anterior temporal lobe | PRIDE | Homo sapiens | LTQ Orbitrap | Martins-de-Souza et al. (2014) | Daniel Martins-de-Souza | Daniel Martins-de-Souza | 2014-06-05 |
| PXD000547 | Proteome of the Human Corpus Callosum | PRIDE | Homo sapiens | LTQ Orbitrap | Martins-de-Souza et al. (2014) | Daniel Martins-de-Souza | Daniel Martins-de-Souza | 2014-06-05 |
| PXD000457 | Large scale proteomics of cholesteatoma | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Britze et al. (2014) | Johan Palmfeldt | | 2014-06-04 |
| PXD000631 | Comparative Exoprotein Profiling of Different Staphylococcus epidermidis strains Reveals Potential Link between Non-classical Protein Export and Virulence | PRIDE | Staphylococcus epidermidis | QSTAR | Siljamäki et al. (2014) | Pia Siljamäki | Tuula A Nyman | 2014-06-04 |
| PXD000587 | Large-scale proteome characterization of the cassava root | PRIDE | Manihot esculenta (Jatropha manihot) | LTQ Orbitrap XL | Vanderschuren et al. (2014) | Katja Baerenfaller | Herve Vanderschuren | 2014-06-03 |
| PXD000866 | iPSC-derived neurons from GBA1-associated Parkinson's disease patients show autophagic/lysosomal dysfunction and impaired calcium homeostasis | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Schöndorf et al. (2014) | Fiona McAllister | Michela Deleidi | 2014-06-03 |
| PXD001007 | Genome-wide identification and functional analysis of Apobec-1 mediated C-to-U RNA editing in mouse small intestine and liver | PRIDE | Mus musculus | Q Exactive | Blanc et al. (2014) | Johannes Graumann | Johannes Graumann | 2014-06-02 |
| PXD000926 | Deep Proteomics of the Xenopus laevis Egg using an mRNA-derived Reference Database | PRIDE | Xenopus laevis (African clawed frog) | Q Exactive | Wühr et al. (2014) | Martin Wuehr | Steven Gygi | 2014-05-30 |
| PXD000871 | Cell-Specific Labeling Enzymes For Analysis of Cell-Cell Communication in Continuous Co-Culture, Part 2 / 2 | PRIDE | Mus musculus | LTQ Orbitrap | Tape et al. (2014) | Christopher Tape | Claus Jorgensen | 2014-05-29 |
| PXD000870 | Cell-Specific Labeling Enzymes For Analysis of Cell-Cell Communication in Continuous Co-Culture, Part 1 / 2 | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap | Tape et al. (2014) | Christopher Tape | Claus Jorgensen | 2014-05-29 |
| PXD000743 | Insight into the protein composition of immunoglobulin light chain deposits of eyelid, orbital, and conjunctival amyloidosis. | PRIDE | Homo sapiens | TripleTOF 5600 | Dataset with its publication pending | Nadia Sukusu Nielsen | Jan J. Enghild | 2014-05-29 |
| PXD000368 | Grayling Pleiotropy on plastic adaptive protein expression change | PRIDE | Thymallus thymallus (Salmo thymallus) | LTQ Orbitrap Velos | Papakostas et al. (2014) | Spiros Papakostas | | 2014-05-28 |
| PXD000865 | Mass spectrometry based draft of the human proteome | PRIDE | Homo sapiens | LTQ Orbitrap Velos; LTQ Orbitrap Elite | Wilhelm et al. (2014) | Hannes Hahne | Bernhard Kuster | 2014-05-28 |
| PXD000781 | Huwe1-mediated ubiquitylation of Dvl defines a novel negative feedback loop in the Wnt signaling pathway | PRIDE | Mus musculus | LTQ Orbitrap Elite | de Groot et al. (2014) | Katerina Sedova | Zbynek Zdrahal | 2014-05-28 |
| PXD000746 | Proteomics of Fuchs’ Endothelial Corneal Dystrophy indicate altered assembly and modulation of the extracellular matrix in Descemet’s membrane | PRIDE | Homo sapiens | TripleTOF 5600 | Poulsen et al. (2014) | Ebbe Toftgaard Poulsen | Jan Johannes Enghild | 2014-05-27 |
| PXD000873 | Analyses of the Xylem Sap Proteomes Identified Candidate Fusarium virguliforme Proteinacious Toxins | PRIDE | Glycine max (Glycine hispida), Fusarium virguliforme | LTQ Orbitrap Velos | Abeysekara & Bhattacharyya (2014) | Nilwala Abeysekara | Madan K Bhattacharyya | 2014-05-23 |
| PXD000976 | Rat Neural Stem Cell Phosphoproteome | PRIDE | Rattus norvegicus | LTQ Orbitrap | Dataset with its publication pending | Xuyang Zhao | Jianguo Ji | 2014-05-23 |
| PXD000625 | Hepatocyte-specific BIRC5 (Survivin)-knockout-mouse model, Subcellular fractionation | PRIDE | Mus musculus | LTQ Orbitrap; instrument model: LTQ Orbitrap | Bracht et al. (2014) | Thilo Bracht | | 2014-05-22 |
| PXD000836 | HOPE-fixation of lung tissue allows retrospective proteome and phosphoproteome studies | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Shevchuk et al. (2014) | Olga Shevchuk | Lothar Jänsch | 2014-05-22 |
| PXD000293 | Ti4+-IMAC label-free quantification | PRIDE | Homo sapiens | LTQ Orbitrap Elite | de Graaf et al. (2014) | Piero Giansanti | Albert J. R. Heck | 2014-05-22 |
| PXD000993 | Virion proteome of Cafeteria roenbergensis virus strain BV-PW1 | PRIDE | Cafeteria roenbergensis | LTQ Orbitrap | Dataset with its publication pending | Matthias Fischer | Leonard Foster | 2014-05-22 |
| PXD000223 | Nipped in the bud: a microbial effector destabilizes MADS-domain transcription factors | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap; instrument model: LTQ Orbitrap | MacLean et al. (2014) | Gerhard Saalbach | | 2014-05-21 |
| PXD000241 | Serine Hydrolases from E. Coli | PRIDE | Escherichia coli | TripleTOF 5600 | Dataset with its publication pending | Dmitry Shamshurin | | 2014-05-20 |
| PXD000237 | Beta vulgaris (sugarbeet) infected with BNYVV (beet necrotic yellow vein virus) | PRIDE | Beta vulgaris (Sugar beet) | LTQ Orbitrap Velos | Dataset with its publication pending | Carolyn Broccardo | | 2014-05-20 |
| PXD000176 | Identifying RasGAP SH2 binding partners in Drosophila using mass spectrometry | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Rowshanravan et al. (2014) | Behzad Rowshanravan | | 2014-05-20 |
| PXD000560 | Chasing protein arginine phosphorylation: development of a selective enrichment method using a trapping mutant phosphatase | PRIDE | Bacteria, Bacillus subtilis subsp. subtilis str. 168 | LTQ Orbitrap Velos | Trentini et al. (2014) | Debora Broch Trentini | Karl Mechtler | 2014-05-19 |
| PXD000568 | Protein abundance changes and ubiquitylation targets identified upon inhibition of the proteasome with Syringolin A | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap XL | Svozil et al. (2014) | Katja Baerenfaller | Katja Baerenfaller | 2014-05-19 |
| PXD000894 | A global non-coding RNA system modulates fission yeast protein levels in response to stress | PRIDE | Schizosaccharomyces pombe 927 | LTQ Orbitrap | Leong et al. (2014) | Hui Sun Leong | Crispin J Miller | 2014-05-19 |
| PXD000789 | H2A.Bbd localizes to DNA synthesis sites | PRIDE | Mus musculus | LTQ Orbitrap | Sansoni et al. (2014) | Andreas Schmidt | Axel Imhof | 2014-05-18 |
| PXD000041 | Hrp3-TAP_Purification from Schizosaccharomyces pombe | PRIDE | Schizosaccharomyces pombe 972h- | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Pointner et al. (2012) | Ignasi Forne | | 2014-05-16 |
| PXD000835 | Pacific Oyster Ctenidia Proteomics | PRIDE | Crassostrea gigas (Pacific oyster) (Crassostrea angulata) | LTQ Orbitrap | Dataset with its publication pending | Emma Timmins-Schiffman | Steven Roberts | 2014-05-15 |
| PXD000480 | Rat prefrontal cortex LC-MS/MS | PRIDE | Rattus norvegicus | LTQ Orbitrap | Farrelly et al. (2014) | Lorna Farrelly | | 2014-05-13 |
| PXD000937 | Mariprofundus ferroooxydans PV-1 osmotic shock vs extraction with NaOH LC-MSMS | PRIDE | Mariprofundus ferrooxydans PV-1 | LTQ Orbitrap | Dataset with its publication pending | Roman Barco | Katrina Edwards | 2014-05-13 |
| PXD000663 | A high-confidence glycosome proteome for procyclic form Trypanosoma brucei by epitope-tag organelle enrichment and SILAC | PRIDE | Trypanosoma brucei | LTQ Orbitrap Velos | Güther et al. (2014) | Michael Urbaniak | | 2014-05-13 |
| PXD000681 | Probing tyrosine kinase inhibitors specificity | PRIDE | Homo sapiens | LTQ Orbitrap; LCQ Classic; LTQ Orbitrap Velos; LTQ Orbitrap Elite; TripleTOF 5600 | Giansanti et al. (2014) | Piero Giansanti | Albert J.R. Heck | 2014-05-12 |
| PXD000574 | Dectin-1/Syk pathway activates autophagy-dependent unconventional protein secretion from human macrophages | PRIDE | Homo sapiens | QSTAR | Öhman et al. (2014) | Tuula Nyman | | 2014-05-12 |
| PXD000684 | Proteomics of Pseudomonas aeruginosa PAO1 and PA14 | PRIDE | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228), Pseudomonas aeruginosa PA14 | LTQ Orbitrap | Kwon et al. (2014) | Taejoon Kwon | Edward Marcotte | 2014-05-08 |
| PXD000592 | Mouse Core Acrosomal Matrix LC-MSMS | PRIDE | Mus musculus | LTQ Orbitrap Velos | Guyonnet, Egge & Cornwall (2014) | Dr Gail A Cornwall | | 2014-05-07 |
| PXD000608 | Proteomics of cerebrospinal fluid microvesicles | PRIDE | Homo sapiens | Q Exactive | Chiasserini et al. (2014) | D Chiasserini | | 2014-05-07 |
| PXD000807 | Human oral cancer brush biopsy iTRAQ | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Yang et al. (2014) | Tim Griffin | Timothy Jon Griffin | 2014-05-07 |
| PXD000495 | Pea Seedling Mitochondrial Lysine Acetylome | PRIDE | Pisum sativum (Garden pea) | LTQ Orbitrap | Smith-Hammond, Hoyos & Miernyk (2014) | Colin Smith-Hammond | Jan A. Miernyk | 2014-05-01 |
| PXD000318 | Spider genomes provide insight into composition, function and evolution of venom and silk | PRIDE | Stegodyphus mimosarum, Acanthoscurria geniculata | TripleTOF 5600; instrument model: TripleTOF 5600 | Sanggaard et al. (2014) | Kristian Wejse Sanggaard | | 2014-05-01 |
| PXD000932 | The Haemophilus ducreyi LspA1 Protein Inhibits Phagocytosis By Using a New Mechanism Involving Activation of C-Terminal Src Kinase | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Dodd et al. (2014) | David Trudgian | Eric Hansen | 2014-04-29 |
| PXD000850 | SIRT_mutant interactome | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Lee et al. (2014) | Dae-Kyum Kim | Kwan Yong Choi | 2014-04-28 |
| PXD000159 | SIRT6 and SIRT7 binding proteome | PRIDE | Homo sapiens | LTQ Orbitrap | Lee et al. (2014) | Dae-Kyum Kim | | 2014-04-28 |
| PXD000505 | Campylobacter concisus UNSWCD GeLC-MSMS | PRIDE | Campylobacter concisus UNSWCD | instrument model: ESI-TRAP | Pang et al. (2014) | A Tay | | 2014-04-28 |
| PXD000504 | Campylobacter concisus strain BAA-1547 GeLC-MSMS | PRIDE | Campylobacter concisus (strain 13826) | instrument model: ESI-TRAP | Pang et al. (2014) | A Tay | | 2014-04-28 |
| PXD000928 | Melanoma metastases: association between S100A13 expression and chemotherapy resistance | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Azimi et al. (2014) | Maria Pernemalm | Janne Lehtiö | 2014-04-25 |
| PXD000070 | Plasmodium falciparum schizont phosphoproteome | PRIDE | Plasmodium falciparum (isolate 3D7) | LTQ Orbitrap Velos; instrument model: LTQ Orbitrap Velos ETD | Collins et al. (2014) | Mark Collins | | 2014-04-24 |
| PXD000561 | A draft map of the human proteome | PRIDE | Homo sapiens | LTQ Orbitrap Velos; LTQ Orbitrap Elite | Pinto et al. (2014)Kim et al. (2014) | Akhilesh Pandey | Akhilesh Pandey | 2014-04-24 |
| PXD000917 | Proteomic identification of anti-tetanus toxoid antibodies from human serum (HD1) | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Lavinder et al. (2014)Boutz et al. (2014) | Daniel Boutz | Edward Marcotte | 2014-04-24 |
| PXD000916 | Proteomic identification of monoclonal antibodies from rabbit serum and analysis of FDR using differential cysteine labeling | PRIDE | Oryctolagus cuniculus | LTQ Orbitrap Velos | Boutz et al. (2014) | Daniel Boutz | Edward Marcotte | 2014-04-24 |
| PXD000671 | Leishmania donovani phosphoproteome during differentiation and as a response to environmental signals | PRIDE | Leishmania donovani | QSTAR | Tsigankov et al. (2014) | Polina Tsigankov | Dan Zilberstein | 2014-04-24 |
| PXD000704 | Glycoprotein Signatures for Aggressive Prostate Cancer via SWATH mass spectrometry | PRIDE | Homo sapiens | TripleTOF 5600 | Liu et al. (2014) | Yansheng Liu | Ruedi Aebersold | 2014-04-23 |
| PXD000133 | Equine Cerebrospinal Fluid | PRIDE | Equus caballus | LTQ | Dataset with its publication pending | Carolyn Broccardo | | 2014-04-23 |
| PXD000532 | SOD cambium Proteomics Data | PRIDE | Populus tremula x Populus tremuloides | instrument model: Q-TOF Ultima; Q-Tof ultima | Srivastava et al. (2013) | Joakim Bygdell | | 2014-04-17 |
| PXD000475 | Yersinia enterocolitica SOR17 | PRIDE | Bacteria, Eubacteriaceae, Yersinia enterocolitica | LTQ Orbitrap; instrument model: LTQ Orbitrap | Kakoschke et al. (2014) | Ombeline Rossier | | 2014-04-16 |
| PXD000579 | A proteome reference map of the wine lactic acid bacterium Oenococcus oeni ATCC BAA-1163 | PRIDE | Oenococcus oeni | instrument model: 4800 Plus MALDI TOF/TOF | Mohedano Mde et al. (2014) | Sergio Ciordia Higuera | | 2014-04-16 |
| PXD000414 | Quantitiative phosphoproteomic analysis of SKS1 signaling network involved in yeast filamentous growth by LC-MS in combination with SILAC | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap | Johnson et al. (2014) | Hye Kyong Kweon | | 2014-04-16 |
| PXD000326 | A multi-omic analysis of an Enterococcus faecium mutant reveals genetic mutation and dramatic changes of mRNA and protein expressions | PRIDE | Enterococcus faecalis (Streptococcus faecalis) | TripleTOF 5600 | Chang et al. (2013) | Liu liu | | 2014-04-16 |
| PXD000350 | Sumoylated hnrnpa2b1 controls the sorting of miRNAs into two exosomes through binding to specific motifs | PRIDE | Homo sapiens | LTQ Orbitrap | Villarroya-Beltri et al. (2013) | Marco Trevisan-Herraz | | 2014-04-16 |
| PXD000900 | Confetti: A Multi-protease Map of the HeLa Proteome for Comprehensive Proteomics | PRIDE | Homo sapiens | Q Exactive; LTQ Orbitrap Elite | Guo et al. (2014) | David Trudgian | Hamid Mirzaei | 2014-04-16 |
| PXD000732 | Understanding the antimicrobial mechanism of TiO2-based nanocomposite films in a pathogenic bacterium | PRIDE | Pseudomonas aeruginosa | TripleTOF 5600 | Kubacka et al. (2014) | Sergio Ciordia | Juan Pablo Albar Ramirez | 2014-04-16 |
| PXD000712 | Small proteome in trypanosomes | PRIDE | Trypanosoma brucei | LTQ Orbitrap | Ericson et al. (2014) | F Butter | Mann | 2014-04-16 |
| PXD000838 | Mitochondrial proteomics investigation of a cellular model of impaired dopamine homeostasis, an early step in Parkinson's disease pathogenesis | PRIDE | Homo sapiens | Synapt MS | Alberio et al. (2014) | Luisa Pieroni | Andrea Urbani | 2014-04-15 |
| PXD000680 | Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination | PRIDE | Homo sapiens | LTQ Orbitrap; Q Exactive; LTQ Orbitrap Elite | Molden et al. (2014) | Rosalynn Molden | Benjamin A Garcia | 2014-04-15 |
| PXD000688 | Human milk and gastric peptidomics | PRIDE | Homo sapiens | 6520 Quadrupole Time-of-Flight LC/MS | Dallas et al. (2014) | David Dallas | David Dallas | 2014-04-15 |
| PXD000038 | Proteomics analysis of wound healing in porcine subcutaneous fatty tissue postmonopolar electrosurgery and harmonic blade incisions. | PRIDE | Sus scrofa domesticus (domestic pig) | LCQ Deca XP Plus | Nanduri et al. (2013) | Ken Pendarvis | | 2014-04-15 |
| PXD000580 | Proteomic analysis of yeast mutant RNA exosome complexes | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | Q-Tof Premier; instrument model: Q-Tof Premier | Lourenço, Leme & Oliveira (2013) | Rogerio Lourenco | | 2014-04-15 |
| PXD000509 | Identification and monitoring of host cell proteins by mass spectrometry combined with high performance immunochemistry testing | PRIDE | Escherichia coli | LTQ Orbitrap; instrument model: LTQ Orbitrap | Bomans et al. (2013) | Patrick Bulau | | 2014-04-15 |
| PXD000289 | Sulfolobus acidocaldarius phosphoproteome | PRIDE | Sulfolobus acidocaldarius | Bruker Daltonics HCT Series | Reimann et al. (2013) | Trong Khoa Pham | | 2014-04-15 |
| PXD000462 | VEGF Study in Primary Human Endothelial Cells | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Hang et al. (2013) | Nathan Tedford | | 2014-04-15 |
| PXD000567 | Protein abundance changes and ubiquitylation targets identified upon inhibition of the proteasome with Syringolin A | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap XL | Svozil et al. (2014) | Katja Baerenfaller | Katja Baerenfaller | 2014-04-15 |
| PXD000566 | Protein abundance changes and ubiquitylation targets identified upon inhibition of the proteasome with Syringolin A | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap XL | Svozil et al. (2014) | Katja Baerenfaller | Katja Baerenfaller | 2014-04-15 |
| PXD000565 | Protein abundance changes and ubiquitylation targets identified upon inhibition of the proteasome with Syringolin A | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap XL | Svozil et al. (2014) | Katja Baerenfaller | Katja Baerenfaller | 2014-04-15 |
| PXD000642 | Quantitative proteomics of extracellular vesicles released from human primary macrophages upon beta/glucan stimulation | PRIDE | Homo sapiens | QSTAR | Cypryk et al. (2014) | Tuula Nyman | | 2014-04-15 |
| PXD000521 | Protein abundance changes and ubiquitylation targets identified upon inhibition of the proteasome with Syringolin A | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap XL | Svozil et al. (2014) | Katja Baerenfaller | Katja Baerenfaller | 2014-04-15 |
| PXD000374 | SRM-analysis of Podospora anserina mitochondria (Plohnke) | PeptideAtlas | Podospora anserina | TSQ Vantage | Plohnke et al. (2014) | Nicole Plohnke | | 2014-04-14 |
| PXD000300 | Changes in mouse pathways after high-fat diet (Sabido, et al.) | PeptideAtlas | Mus musculus | 4000 QTRAP | Sabidó et al. (2013) | Eduard Sabidó | | 2014-04-14 |
| PXD000291 | Quantitative microdissected breast cancer analysis (Liu, et al.) | PeptideAtlas | Homo sapiens | Xevo TQ-S | Liu et al. (2013) | Ning Qing Liu | | 2014-04-14 |
| PXD000232 | Variation across lineages of M. tuberculosis (N. Kruh-Garcia) | PeptideAtlas | Mycobacterium tuberculosis | Xevo TQ-S | Kruh-Garcia et al. (2014) | Nicole Kruh-Garcia | | 2014-04-14 |
| PXD000648 | MRM dataset of 185 one hit wonders in human liver | PeptideAtlas | Homo sapiens | 4000 QTRAP | Chen et al. (2014) | Chen Chen | Pengyuan Yang | 2014-04-14 |
| PXD000469 | Proteomics of pollen development | PRIDE | Nicotiana tabacum (Common tobacco) | LTQ Orbitrap | Ischebeck et al. (2014) | Volker Egelhofer | | 2014-04-14 |
| PXD000601 | Mouse Liver Circadian Proteome | PRIDE | Mus musculus | LTQ Orbitrap | Robles, Cox & Mann (2014) | Maria S. Robles | | 2014-04-14 |
| PXD000557 | Pine Golgi membranes from xylem enriched by FFE | PRIDE | Pinus radiata (Monterey pine) | instrument model: TripleTOF | Parsons et al. (2013) | Joshua Heazlewood | | 2014-04-14 |
| PXD000541 | 2D-LC/MS/MS analysis of Escherichia coli during exposure an abrupt downshift in water activity | PRIDE | Escherichia coli | LTQ Orbitrap | Kocharunchitt et al. (2014) | Chawalit Kocharunchitt | | 2014-04-14 |
| PXD000583 | 2D-LC/MS/MS analysis of Escherichia coli under optimal growth condition | PRIDE | Escherichia coli | LTQ Orbitrap | Kocharunchitt et al. (2014) | Chawalit Kocharunchitt | | 2014-04-14 |
| PXD000635 | Multifactorial Comparative Proteomic Study of Cytochrome P450 2E1 Function in Chronic Alcohol Administration | PRIDE | Mus musculus | 4800 Proteomics Analyzer | Wang et al. (2014) | Rong Wang | | 2014-04-11 |
| PXD000472 | Environmental stress affects the activity of metabolic and growth factor signaling networks and induces autophagy markers in breast cancer cell lines | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Casado et al. (2014) | Pedro Casado-Izquierdo | | 2014-04-11 |
| PXD000248 | Characterization of individual mouse cerebrospinal fluid proteomes | PRIDE | Mus musculus | LTQ Orbitrap Velos | Smith et al. (2014) | Matthew Monroe | | 2014-04-09 |
| PXD000852 | Native protein mapping and visualization of protein interactions in human plasma high-density lipoprotein by 2-DE and LC-MS/MS | PRIDE | Homo sapiens | Synapt MS | Jin et al. (2014) | Ya Jin | Ya Jin | 2014-04-07 |
| PXD000445 | Proteomic profiling of colorectal adenomas | PRIDE | Homo sapiens | instrument model: LTQ Orbitrap Velos; LTQ Orbitrap Velos | Uzozie et al. (2014) | Anuli Uzozie | PD Dr. Giancarlo Marra | 2014-04-03 |
| PXD000170 | Identifying sources of tick blood meals using unidentified tandem mass spectral libraries | PRIDE | Panthera leo , Macropus rufus (Red kangaroo) (Megaleia rufa), Alligator mississippiensis (American alligator), Capra hircus , Colobus guereza (Mantled guereza) (Eastern black-and-white colobus monkey), Strix varia (Barred owl), Eryx colubrinus loveridgei, | LCQ Classic | Önder Ö et al. (2013) | Henry Lam | | 2014-04-03 |
| PXD000775 | Lactate racemase proteins MALDI TOF/TOF | PRIDE | Lactobacillus plantarum | 4800 Proteomics Analyzer | Desguin et al. (2014) | Pascal Hols | MORSOMME Pierre | 2014-04-02 |
| PXD000851 | Membrane proteomic analysis of colorectal cancer tissue | PRIDE | Homo sapiens | LTQ Orbitrap | Kume et al. (2014) | Hideaki Kume | Takeshi Tomonaga | 2014-04-02 |
| PXD000218 | System-level analysis of cancer and stomal cell specific proteomes reveals extensive reprogramming of phosphorylation networks by tumor microenvironment | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap; instrument model: LTQ Orbitrap | Rajeeve et al. (2014) | Vinothini Rajeeve | | 2014-04-02 |
| PXD000510 | Synechococcus elongatus PCC7942 proteome's cyclic rhythm by LC-MSMS | PRIDE | Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) | LTQ Orbitrap Velos | Guerreiro et al. (2014) | Ana C. Guerreiro | Albert J.R. Heck | 2014-04-02 |
| PXD000540 | Wheat leaf phosphoproteome | PRIDE | Triticum aestivum | LTQ Orbitrap | Lv et al. (2014) | Dong-Wen Lv | Yue-Ming Yan | 2014-04-01 |
| PXD000864 | Label-free based proteomic study of Thermoanaerobacter tengcongensis | PRIDE | Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Caldanaerobacter subterraneus subsp. tengcongensis) | LTQ Orbitrap Velos | Dataset with its publication pending | Bo Wen | Bo Wen | 2014-04-01 |
| PXD000433 | Quantitative phosphoproteomics of Phytophthora infestans life stages | PRIDE | Phytophthora infestans | instrument model: LTQ Orbitrap XL; LTQ Orbitrap XL | Resjö et al. (2014) | Svante Resjo | | 2014-03-27 |
| PXD000090 | Bombyx mori anterior silk gland LC-MS/MS | PRIDE | Bombyx mori (Silk moth) | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Yi et al. (2013) | qiying yi | | 2014-03-26 |
| PXD000379 | DJ-1 as high-fat diet associated protein | PRIDE | Mus musculus | HCTultra; LTQ Orbitrap Elite | Poschmann et al. (2014) | Gereon Poschmann | | 2014-03-26 |
| PXD000854 | Protein validation of Geobacter Sulfurreducens | PRIDE | Geobacter sulfurreducens | LTQ Orbitrap | Dataset with its publication pending | Matthew Monroe | Richard D. Smith | 2014-03-20 |
| PXD000556 | E. coli BW25113 and knock-out mutants (delta-pka, delta-arcA and delta-pka_arcA) LC MS/MS | PRIDE | Escherichia coli, Acyrthosiphon pisum (Pea aphid) | LTQ Orbitrap | Peebo et al. (2014) | Karl Peebo | | 2014-03-19 |
| PXD000847 | Mouse plasma QSRM (Whiteaker et al.) | PeptideAtlas | Mus musculus | 4000 Q-Trap | Whiteaker et al. (2011) | Terry Farrah | Amanda Paulovich | 2014-03-18 |
| PXD000846 | Human CAP urine (Huettenhain et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Hüttenhain et al. (2012) | Ruth Hüttenhain | Ruedi Aebersold | 2014-03-18 |
| PXD000845 | ATAQS T-47D cell line | PeptideAtlas | Homo sapiens | 4000 Q-Trap | Brusniak et al. (2011) | Terry Farrah | Ruedi Aebersold | 2014-03-18 |
| PXD000844 | UVic top 45 plasma 2008 (Letarte) | PeptideAtlas | Homo sapiens | 4000 Q-Trap | no publication | Terry Farrah | Ruedi Aebersold | 2014-03-18 |
| PXD000843 | MRM verification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (All centers - part 1) | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000842 | MRM qualification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (Brazil) | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000841 | MRM qualification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (US) | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000833 | MRM qualifcation of secreted proteins in Brucella-infected/non-infected trophoblast cell lines | PeptideAtlas | Homo sapiens | 4000 Q-Trap | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000840 | MRM qualifcation of secreted proteins differentially expressed in Brucella-infected macrophage cells vs non-infected macrophage cells | PeptideAtlas | Homo sapiens | 4000 Q-Trap | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000832 | MRM Qualification of Biomarkers of Immunogenicity and Response Prediction of Influenza A H1N1 Vaccine | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000831 | MRM Qualification of Biomarkers of Immunogenicity and Response Prediction of Influenza A H5N1 Vaccine | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000830 | MRM qualification of plasma/serum protein biomarkers for progression from MTB infection to disease | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000829 | MRM verification of plasma/serum protein biomarkers for progression from MTB infection to disease | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000827 | MRM verification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (All centers - part 2) | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000825 | MRM Verification of serum protein biomarkers for brucellosis treatment | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000826 | MRM qualification of serum proteinMRM qualification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (South Africa center) | PeptideAtlas | Homo sapiens | QTRAP 5500 | no publication | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000824 | MRM qualifcation of serum protein biomarkers for brucellosis treatment | PeptideAtlas | Homo sapiens | 4000 Q-Trap | Unpublished | Eustache Paramithiotis | Eustache Paramithiotis | 2014-03-18 |
| PXD000603 | Lung cancer and Normal Lung Tissue LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Ahn et al. (2014) | Je-Yoel Cho | | 2014-03-18 |
| PXD000178 | Cotton Fiber Glycoproteome | PRIDE | Gossypium | ultraflex | Kumar et al. (2013) | Saravanan Kumar | | 2014-03-18 |
| PXD000272 | Low abundance of the matrix arm of complex I in the mitochondria predicts longevity | PRIDE | Mus musculus | LTQ Orbitrap | Miwa et al. (2014) | Achim Treumann | | 2014-03-18 |
| PXD000769 | Colon cancer stem cell over-expressing Np63α | PRIDE | Homo sapiens | micrOTOF II | D'Aguanno et al. (2014) | Simona D'Aguanno | Prof. Andrea Urbani | 2014-03-17 |
| PXD000768 | Colon cancer stem cell over-expressing TAp63α | PRIDE | Homo sapiens | micrOTOF II | D'Aguanno et al. (2014) | Simona D'Aguanno | Prof. Andrea Urbani | 2014-03-17 |
| PXD000620 | Cervico-Vaginal mucus proteins of buffalo | PRIDE | Bubalus bubalis | Thermo Electron instrument model | Muthukumar et al. (2014) | Subramanian Muthukumar | G Archunan | 2014-03-17 |
| PXD000821 | In vivo SILAC-based proteomics reveals phosphoproteome changes during mouse skin carcinogenesis | PRIDE | Mus musculus | LTQ Orbitrap Velos; LTQ Orbitrap Elite | Zanivan et al. (2013) | Sara Zanivan | Sara Zanivan | 2014-03-13 |
| PXD000678 | A Proteomic Chronology of Gene Expression through the Cell Cycle in Human Myeloid Leukemia Cells. | PRIDE | Homo sapiens | LTQ Orbitrap Velos; Q Exactive | Ly et al. (2014) | Vackar Afzal | Prof Angus Lamond | 2014-03-12 |
| PXD000694 | Proteomic analysis of Giardia lamblia ESV and PV organelle enriched fractions | PRIDE | Giardia intestinalis (strain ATCC 50803 / WB clone C6) (Giardia lamblia) | LTQ Orbitrap | Wampfler et al. (2014) | Adrian Hehl | Adrian B. Hehl | 2014-03-11 |
| PXD000206 | 4-plex iTRAQ comparative proteomics Anabaena circinalis | PRIDE | Dolichospermum circinale AWQC310F, Dolichospermum circinale AWQC131C | QSTAR | D'Agostino et al. (2014) | Paul D'Agostino | | 2014-03-11 |
| PXD000600 | Temporal dynamics of protein synthesis and secretion during LPS activation of macrophages | PRIDE | Mus musculus | LTQ Orbitrap Velos | Eichelbaum & Krijgsveld (2014) | Katrin Eichelbaum | | 2014-03-07 |
| PXD000686 | Tousled-like kinases phosphorylate Asf1 to promote histone supply during DNA replication | PRIDE | Homo sapiens | LTQ Orbitrap | Klimovskaia et al. (2014) | Clifford Young | Ole Nørregaard Jensen | 2014-03-06 |
| PXD000363 | PG-regulated Synechocystis sp. PCC6803 | PRIDE | Synechocystis sp., Synechocystis sp. PCC 6803 | LTQ FT; instrument model: LTQ FT; instrument model: LTQFT | Talamantes et al. (2014) | Laszlo Prokai | | 2014-03-06 |
| PXD000181 | Short cationic antimicrobial peptide RWRWRW-NH2 inhibits cell wall biosynthesis and bacterial respiration by delocalizing essential membrane proteins | PRIDE | Bacillus subtilis (strain 168) | LTQ Orbitrap | Dataset with its publication pending | Andreas Otto | | 2014-03-06 |
| PXD000618 | Characterization of the proteome of human blood platelet sercretory granules using gas-phase fractionation (GPF) | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Zufferey et al. (2014) | Pierre Fontana | Pierre Fontana | 2014-03-06 |
| PXD000348 | ESI-LC-MS/MS of magnetosome membrane enclosing magnetite particles of Rhodospirillum rubrum_ABG6X | PRIDE | Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Kolinko et al. (2014) | Isabel Kolinko | | 2014-03-05 |
| PXD000356 | Mass spectrometric analysis of Podospora anserina mitochondria | PRIDE | Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina) | LTQ Orbitrap | Plohnke et al. (2014) | Nicole Plohnke | | 2014-03-05 |
| PXD000046 | Mouse Cerebellum DNA-Damage 2D LC-MS/MS | PRIDE | Mus musculus | LTQ Orbitrap Velos | de Graaf et al. (2013) | Erik L. de Graaf | | 2014-03-05 |
| PXD000226 | Human Uterine Smooth Muscle S-nitrosoproteome | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Ulrich et al. (2013) | Craig Ulrich | | 2014-03-03 |
| PXD000479 | Annotation of the zebrafish genome through an integrated transcriptomic and proteomic analysis | PRIDE | Danio rerio (Brachydanio rerio) | 6520 Quadrupole Time-of-Flight LC/MS; LTQ Orbitrap Velos | Kelkar et al. (2014) | Akhilesh Pandey | | 2014-02-26 |
| PXD000738 | SILAC-based proteomic quantification of chemoattractant induced cytoskeleton dynamics on a second to minute timescale | PRIDE | Dictyostelium discoideum (Slime mold) | LTQ Orbitrap Velos | Sobczyk, Wang & Weijer (2014) | Vackar Afzal | Cornelis J Weijer | 2014-02-26 |
| PXD000173 | Immunoprecipitated proteins associated with foci-forming Eno2p-EGFP-FLAG or non-forming Eno2V22Ap-EGFP-FLAG in yeast Saccharomyces cerevisiae under hypoxia | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Velos | Miura et al. (2013) | Mitsuyoshi Ueda | | 2014-02-25 |
| PXD000177 | Quantitative Phosphoproteomics after auxin-stimulated lateral root induction | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap XL | Zhang et al. (2013) | Hongtao Zhang | | 2014-02-25 |
| PXD000434 | Erythrocyte Proteome & Terminome | PRIDE | Homo sapiens | LTQ Orbitrap | Lange et al. (2014) | Philipp Lange | | 2014-02-24 |
| PXD000511 | Cdh1 Proteomic Analysis | PRIDE | Mus musculus | LTQ Orbitrap Velos | Eguren et al. (2014) | Fernando Garcia | | 2014-02-20 |
| PXD000337 | N-terminal-oriented proteogenomics for the marine bacterium Roseobacter denitrificans | PRIDE | Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) | LTQ Orbitrap | Bland et al. (2014) | Jean ARMENGAUD | | 2014-02-19 |
| PXD000493 | Proteomics dataset for interphase chromatin probabilities | PRIDE | Homo sapiens | LTQ Orbitrap; LTQ Orbitrap Velos | Kustatscher et al. (2014) | Georg Kustatscher | Juri Rappsilber | 2014-02-18 |
| PXD000682 | Transcriptomic and Proteomic Response of HC-04 to hepatocyte growth factor (HGF) | PRIDE | Homo sapiens | 6520 Quadrupole Time-of-Flight LC/MS | Tao et al. (2014) | Dingyin Tao | Rhoel R. Dinglasan | 2014-02-18 |
| PXD000354 | Rat cardiac mitochondrial proteome and phosphoproteome | PRIDE | Rattus norvegicus | instrument model: LTQ Orbitrap VelosPro | Ferreira et al. (2014) | Francesco Mattia Mancuso | | 2014-02-14 |
| PXD000675 | A Targeted in Vivo SILAC Approach for Quantification of Drug Metabolism Enzymes: Regulation by the Constitutive Androstane Receptor | PRIDE | Mus musculus | LTQ Orbitrap | Macleod et al. (2014) | Kenneth MacLeod | Jeffrey Tze-Jen Huang | 2014-02-14 |
| PXD000581 | Combined Proteomic and Transcriptomic Interrogation of the Venom Gland of Conus geographus | PRIDE | Conus geographus (Geography cone) (Nubecula geographus) | instrument model: Ultraflex III MALDI TOF/TOF | Safavi-Hemami et al. (2014) | Paul Veith | | 2014-02-14 |
| PXD000460 | Pithovirus particle proteome | PRIDE | unidentified | instrument model: LTQ-Orbitrap Velos pro; LTQ Orbitrap Velos | Legendre et al. (2014) | Yohann Coute | | 2014-02-13 |
| PXD000401 | Human CSF LC-MS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Elise Aasebo | | 2014-02-13 |
| PXD000604 | Differentially expressed proteins in benign and malignant adrenocortical tumors | PRIDE | Homo Sapiens | LTQ Orbitrap | Kjellin et al. (2014) | Hanna Kjellin | | 2014-02-11 |
| PXD000597 | Quantitative phosphoproteomics unveils temporal dynamics of thrombin signaling in human endothelial cells | PRIDE | Homo sapiens | LTQ Orbitrap Elite | van den Biggelaar et al. (2014) | Sara Zanivan | Sara Zanivan | 2014-02-07 |
| PXD000745 | Quantification of ErbB network proteins in three cell types | PeptideAtlas | Homo sapiens | TSQ Vantage; QTRAP 5500 | Kiel et al. (2014) | H. Alexander Ebhardt | Ruedi Aebersold | 2014-02-06 |
| PXD000507 | Acetylation Dynamics and Stoichiometry in Saccharomyces cerevisiae | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Velos; Q Exactive | Weinert et al. (2014) | Brian Weinert | | 2014-02-03 |
| PXD000072 | High precision platelet releasate definition by quantitative reversed protein profiling | PRIDE | Homo sapiens | instrument model: LTQ Orbitrap Velos; LTQ Orbitrap Velos | Wijten et al. (2013) | Patrick Wijten | | 2014-02-03 |
| PXD000202 | Archael ubiquitin-like SAMP3 is isopeptide-linked to Proteins by an UbaA-dependent mechanism | PRIDE | Haloferax volcanii (Halobacterium volcanii) | LTQ Orbitrap Velos | Miranda et al. (2014) | Haike Antelmann | | 2014-02-03 |
| PXD000410 | Peatland Soil Community Proteomics | PRIDE | unidentified soil organism | LTQ Orbitrap Elite | Dataset with its publication pending | Eun-Hae Kim | | 2014-02-03 |
| PXD000450 | HLA-B40-peptidome | PRIDE | Homo Sapiens | TripleTOF 5600; instrument model: TripleTOF 5600 | Marcilla et al. (2014) | Miguel Marcilla | | 2014-02-03 |
| PXD000269 | Minimalistic sample processing | PRIDE | Schizosaccharomyces pombe (Fission yeast), Homo sapiens , Saccharomyces cerevisiae (Baker's yeast) | Q Exactive | Dataset with its publication pending | Mario Oroshi | | 2014-01-31 |
| PXD000306 | Proteomic identification of rainbow trout seminal plasma proteins | PRIDE | Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri) | instrument model: LTQ; LTQ | Nynca et al. (2014) | Joanna Nynca | | 2014-01-31 |
| PXD000196 | Shotgun proteomics of nucleoids from irradiated Deinococcus cells | PRIDE | Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923), Deinococcus radiodurans | LTQ Orbitrap; instrument model: LTQ-Orbitrap | de la Tour et al. (2013) | Jean ARMENGAUD | | 2014-01-31 |
| PXD000535 | CHPP chr 1,8,20 proteome dataset using the HCC cell lines of Hep3B and MHCC97H, instrument is AB5600, part 3 of 3 | PRIDE | Homo sapiens | instrument model: AB 5600 | Dataset with its publication pending | Zhang Chengpu Zhang Chengpu | | 2014-01-31 |
| PXD000203 | Mouse splenocyte proteome | PRIDE | Mus musculus | LTQ Orbitrap Velos | Cao & Robinson (2014) | Zhiyun Cao | | 2014-01-31 |
| PXD000487 | A proteome analysis of Bradyrhizobium japonicum USDA 110 grown in minimal medium containing arabinose suggests that oxalate oxidation extends the arabinose degradation branch via glycolaldehyde. | PRIDE | Bradyrhizobium japonicum (strain USDA 110) | LTQ Orbitrap | Koch et al. (2014) | Ulrich Omasits | | 2014-01-30 |
| PXD000400 | Identification of differentially expressed proteins in direct expressed prostatic secretions of men with organ-confined versus extracapsular prostate cancer. | PRIDE | Homo sapiens | LTQ Orbitrap | Kim et al. (2012) | Thomas Kislinger | | 2014-01-30 |
| PXD000713 | Plant SILAC: Stable-Isotope Labelling with Amino Acids of Arabidopsis Seedlings for Quantitative Proteomics. | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Lewandowska et al. (2013) | Vackar Afzal | Prof Angus Lamond | 2014-01-30 |
| PXD000022 | C2C12 Myoblasts and Myotubes exosomes | PRIDE | Mus musculus , Bos taurus , Equus caballus | LTQ Orbitrap | Forterre et al. (2014) | Yohann Couté | | 2014-01-29 |
| PXD000427 | Human substantia nigra proteome dataset | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Licker et al. (2014) | L Virginie | | 2014-01-29 |
| PXD000149 | The potato tuber mitochondrial proteome | PRIDE | Solanum tuberosum | LTQ Orbitrap | Salvato et al. (2014) | Jay J Thelen | | 2014-01-29 |
| PXD000221 | Proteins from Outer Membrane Vesicules of Pseudomonas syringae Lz4W | PRIDE | Pseudomonas sp. | LTQ Orbitrap Velos | Kulkarni, Swamy ChV & Jagannadham (2014) | Jagannadham Medicharla V | | 2014-01-29 |
| PXD000643 | Human glomerular cell-derived extracellular mantrix | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Byron et al. (2014) | Rachel Lennon | | 2014-01-29 |
| PXD000316 | A Saccharomyces Cerevisiae model reveals in vivo functional impairment of the ogden syndrome n-terminal acetyltransferase Naa10-S37p mutant | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Van Damme et al. (2014) | Pieter-Jan De Bock | | 2014-01-29 |
| PXD000412 | Human dental calculus LC-MS/MS | PRIDE | Homo sapiens , Ovis, Bos taurus | LTQ Orbitrap Velos; Q Exactive; maXis | Dataset with its publication pending | Christina Warinner | Christina G Warinner | 2014-01-29 |
| PXD000492 | CDK regulated chicken chromatin | PRIDE | Gallus gallus | LTQ Orbitrap | Kustatscher et al. (2014) | Georg Kustatscher | Juri Rappsilber | 2014-01-29 |
| PXD000314 | Sequential Phosphoproteomic Enrichment by Complementary Metal-directed Immobilized Metal Ion Affinity Chromatography: Case Study on Kinase Substrate Mapping in Human Lung Cancer Tissue | PRIDE | Homo sapiens | instrument model: TT5600 | Tsai et al. (2014) | Chia-Feng Tsai | | 2014-01-29 |
| PXD000711 | Comparative proteomics of two life cycle stages of stable isotope-labeled Trypanosoma brucei reveals novel components of the parasite's host adaptation machinery. | PRIDE | Trypanosoma brucei | LTQ Orbitrap; Q Exactive | Ericson et al. (2014)Butter et al. (2013) | F Butter | Matthias Mann | 2014-01-28 |
| PXD000421 | PAPE - Pre-fractionation assisted phosphoprotein enrichment, a novel approach for phosphoproteomic analysis of green tissues from plants | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Dataset with its publication pending | Ines Lassowskat | | 2014-01-28 |
| PXD000638 | Proteomic analysis of the thermophilic methylotroph Bacillus methanolicus MGA3: 50°C versus 37°C | PRIDE | Bacillus methanolicus | LTQ Orbitrap; instrument model: LTQ Orbitrap | Müller et al. (2014) | Miriam Bortfeld-Miller | | 2014-01-28 |
| PXD000637 | Proteomic analysis of the thermophilic methylotroph Bacillus methanolicus MGA3 | PRIDE | Bacillus methanolicus | LTQ Orbitrap; instrument model: LTQ Orbitrap | Müller et al. (2014) | Miriam Bortfeld-Miller | | 2014-01-28 |
| PXD000438 | Super-SILAC analysis of human lung primary tumor-derived xenografts LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Zhang et al. (2014) | Wen Zhang | | 2014-01-28 |
| PXD000494 | Lactococcus lactis protein turnover | PRIDE | Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis) | LTQ Orbitrap | Dataset with its publication pending | Liisa Arike | | 2014-01-28 |
| PXD000383 | QUEST-MS for plasma biomarkers complementing the specificity of PSA test | PRIDE | Homo sapiens | instrument model: LTQ-Orbitrap-Velos | Ueda et al. (2013) | Koji Ueda | | 2014-01-28 |
| PXD000674 | PeptideShaker | PRIDE | Homo sapiens | Q Exactive | Dataset with its publication pending | Marc Vaudel | Lennart Martens | 2014-01-27 |
| PXD000191 | Phaeodactylum tricornutum oxidative stress | PRIDE | Phaeodactylum tricornutum | Synapt MS | Rosenwasser et al. (2014) | Yishai Levin | | 2014-01-23 |
| PXD000695 | In-depth proteomic analyses of ovarian cancer cell line exosomes reveals differential enrichment of functional categories compared to the NCI 60 proteome. | PRIDE | Homo sapiens | Q Exactive | Sinha et al. (2014) | Thomas Kislinger | Thomas Kislinger | 2014-01-23 |
| PXD000647 | Functional analysis of novel Rab GTPases identified in the proteome of 2 purified Legionella-containing vacuoles from macrophages | PRIDE | Dictyostelium discoideum (Slime mold), Mus musculus , Legionella pneumophila | LTQ Orbitrap Velos | Dataset with its publication pending | Andreas Otto | | 2014-01-23 |
| PXD000377 | Proteomic analysis of purified protein derivative of mycobacterium tuberculosis | PRIDE | Mycobacterium tuberculosis H37Rv | LTQ Orbitrap | Prasad et al. (2013) | Akhilesh Pandey | | 2014-01-23 |
| PXD000456 | Human glomerular extracellular matrix analysed by LC-MSMS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Lennon et al. (2014) | Rachel Lennon | | 2014-01-22 |
| PXD000424 | Unraveling the Neospora caninum secretome by high-resolution mass spectrometry-based proteomics | PRIDE | Neospora caninum (Coccidian parasite) | LTQ Orbitrap; LTQ Orbitrap Velos | Pollo-Oliveira et al. (2013) | Henk W.P. van den Toorn | | 2014-01-20 |
| PXD000198 | Differential proteomics-based identification by MALDI-MSMS and nLC-MSMS of biomarkers in serum of patients with glaucoma | PRIDE | Homo sapiens | autoflex; LTQ Orbitrap Elite | Dataset with its publication pending | Hector Gonzalez-Iglesias | | 2014-01-17 |
| PXD000531 | Human pleural effusion LC-MSMS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Filip Mundt | | 2014-01-14 |
| PXD000255 | Label-free analysis of EAE vs Sham Spinal cord and PBMCs | PRIDE | Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | L Dagley | | 2014-01-13 |
| PXD000260 | Human triple negative breast cancer tissues | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Ning Qing Liu | | 2014-01-13 |
| PXD000658 | Global phosphoproteomic profiling reveals distinct signatures in B-cell non-Hodgkin lymphomas | PRIDE | Homo sapiens | LTQ Orbitrap XL | Rolland et al. (2014) | Damian Fermin | | 2014-01-09 |
| RPXD000669 | Reprocessed: Proteomic and phosphoproteomic data of colorectal cancer tissues and cells for Chromosome-Centric Human Proteome Project | PeptideAtlas | Homo sapiens | LTQ Orbitrap Velos | no publication | Zhi Sun | Eric Deutsch | 2013-12-23 |
| RPXD000668 | Reprocessed: LC-MS/MS of cultured Mycobacterium tuberculosis in a hypoxia/reaeration timecourse | PeptideAtlas | Mycobacterium tuberculosis | LTQ Orbitrap | no publication | Zhi Sun | Eric Deutsch | 2013-12-23 |
| RPXD000667 | Reprocessed: Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives | PeptideAtlas | Mus musculus | LTQ Orbitrap Velos | no publication | Zhi Sun | Eric Deutsch | 2013-12-23 |
| RPXD000665 | Reprocessed: In-depth membrane proteomic study of breast cancer tissues | PeptideAtlas | Homo sapiens | LTQ Orbitrap Velos | no publication | Zhi Sun | Eric Deutsch | 2013-12-20 |
| PXD000569 | S-nitrosylation in Chlamydomonas reinhardtii | PRIDE | Chlamydomonas reinhardtii (Chlamydomonas smithii) | LTQ Orbitrap Velos | Morisse et al. (2014) | Christophe MARCHAND | | 2013-12-19 |
| PXD000367 | Proteomic analysis of outer membrane vesicles from the probiotic strain Escherichia coli Nissle 1917 | PRIDE | Escherichia coli Nissle 1917 | LTQ Orbitrap Velos | Aguilera et al. (2014) | Eliandre de Oliveira | | 2013-12-19 |
| PXD000405 | Ndd1 phosphorylation pattern upon DNA damage | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Velos | Dataset with its publication pending | Dorothea Anrather | | 2013-12-19 |
| PXD000533 | CHPP chr 1,8,20 proteome dataset using the HCC cell lines of Hep3B and MHCC97H, instrument is Q Exactive, part 2 of 3 | PRIDE | Homo sapiens | quadrupole | Dataset with its publication pending | Zhang Chengpu Zhang Chengpu | | 2013-12-19 |
| PXD000623 | Quantification of ErbB network proteins in three cell types using complementary approaches identifies cell general and cell type-specific signaling proteins | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Kiel et al. (2014) | H. Alexander Ebhardt | | 2013-12-18 |
| PXD000470 | Proteome analysis of Brachypodium distachyon leaf under salt stress and recovery | PRIDE | Brachypodium distachyon (Purple false brome) (Trachynia distachya) | 4800 Proteomics Analyzer | Lv et al. (2014) | Dong-Wen Lv | | 2013-12-17 |
| PXD000340 | Brachypodium distachyon three leaf stage LC-MSMS | PRIDE | Brachypodium distachyon (Purple false brome) (Trachynia distachya) | LTQ Orbitrap | Dataset with its publication pending | Dong-Wen Lv | | 2013-12-17 |
| RPXD000650 | Reprocessed: Mycobacterium tuberculosis culture filtrate LC-MS/MS | PeptideAtlas | Mycobacterium tuberculosis H37Rv | LTQ FT | no publication | Zhi Sun | Eric Deutsch | 2013-12-16 |
| PXD000529 | CHPP chr 1,8,20 proteome dataset using the HCC cell lines of MHCC97H and HCCLM3, instrument is Q Exactive, part 1 of 3 | PRIDE | Homo sapiens | quadrupole | Dataset with its publication pending | Zhang Chengpu Zhang Chengpu | | 2013-12-13 |
| PXD000307 | Comparison of phenotypically distinct lattice corneal dystrophies reveals similar plaque proteomes and suggests altered proteolytic turnover rates of the transforming growth factor beta-induced protein (TGFBIp) | PRIDE | Homo sapiens | instrument model: TripleTof 5600 AB Sciex | Dataset with its publication pending | Ebbe Toftgaard Poulsen | | 2013-12-13 |
| PXD000160 | Soybean root tip proteins under flooding with ABA | PRIDE | Glycine max (Glycine hispida) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Dataset with its publication pending | Yohei Nanjo | | 2013-12-13 |
| PXD000503 | Time-resolved substrate degradomics | PRIDE | Mus musculus | LTQ Orbitrap; LTQ Orbitrap Velos | Schlage et al. (2014) | Ulrich auf dem Keller | | 2013-12-13 |
| PXD000234 | Proteomic analysis of serum from Chikungunya patients | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Akhilesh Pandey | | 2013-12-12 |
| PXD000201 | Proteomic Change Associated with Flooding Injury of Soybean | PRIDE | Glycine max (Glycine hispida) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Dataset with its publication pending | Yohei Nanjo | | 2013-12-11 |
| PXD000538 | A novel pulse-chase SILAC strategy measures changes in protein decay and synthesis rates induced by perturbation of proteostasis with an Hsp90 inhibitor. | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Fierro-Monti et al. (2013) | Manfredo Quadroni | | 2013-12-10 |
| PXD000537 | Dynamic impacts of the inhibition of the molecular chaperone Hsp90 on the T-cell proteome have implications for anti-cancer therapy. | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Fierro-Monti et al. (2013) | Manfredo Quadroni | | 2013-12-10 |
| PXD000375 | Global analysis of Cdc14 dephosphorylation sites reveals essential regulatory role in mitosis and cytokinesis | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Kao et al. (2014) | Chia-Feng Tsai | | 2013-12-10 |
| PXD000312 | Mercury Uniquely Alters B-Cell Protein Phosphorylation Profiles | PRIDE | Mus musculus | instrument model: LTQ; LTQ | Dataset with its publication pending | Nicholas Carruthers | | 2013-12-10 |
| PXD000622 | Biomarker discovery for lung nodules | PeptideAtlas | Homo sapiens | QTRAP 5500 | Li et al., submitted | Lik Wee Lee | Paul Kearney | 2013-12-05 |
| PXD000303 | Evaluation of drift time specific collision energies | PRIDE | Homo sapiens | Q Exactive; Synapt MS | Dataset with its publication pending | Ute Distler | | 2013-12-05 |
| PXD000584 | Shotgun Imaging Analyzer Gastric Cancer | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Aquino et al. (2014) | Paulo Carvalho | | 2013-12-05 |
| PXD000602 | UPS1 and UPS2 proteins diluted in E. coli | PRIDE | Escherichia coli | LTQ Velos; LTQ; LTQ Orbitrap Velos | Krey et al. (2014) | Peter Gillespie | | 2013-12-05 |
| PXD000578 | Mass spectrometry-based quantitative proteomics of whole cell lysate from breast cancer cell line MCF7 spiked with 57 protein standards | PRIDE | Homo Sapiens | LTQ Orbitrap | Dataset with its publication pending | AnnSofi Sandberg | | 2013-12-03 |
| PXD000614 | Investigation of proximal phosphorylation and lysine acetylation crosstalk | PeptideAtlas | Rattus norvegicus | QTRAP 5500 | no publication | Benjamin Parker | David E. James | 2013-12-02 |
| PXD000455 | Drosophila melanogaster proteome dataset with high coverage of the genome based on the LC-MS/MS platform | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Xing et al. (2014) | Zhang Chengpu | | 2013-12-02 |
| PXD000242 | Iloprost (2/5 nM) stimulated Platelets | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Florian Beck | | 2013-12-02 |
| PXD000451 | Phosphoproteomic analysis of platelets activated by pro-thrombotic oxidized phospholipids and thrombin | PRIDE | Homo sapiens | LTQ Orbitrap | Zimman et al. (2014) | Bjoern Titz | | 2013-12-02 |
| PXD000192 | Developing Soybean Seed Lysine-N-epsilon-acetylome | PRIDE | Glycine max (Glycine hispida) | LTQ Orbitrap | Smith-Hammond et al. (2014) | Colin Smith-Hammond | | 2013-12-02 |
| PXD000131 | Integrative genome, transcriptome and proteome analysis of rat livers from two different genetic backgrounds | PRIDE | Rattus norvegicus | LTQ Orbitrap Velos; TripleTOF 5600 | Low et al. (2013) | Teck Yew Low | | 2013-11-29 |
| PXD000545 | Photosynthetic Megacomplex in Synechosystis 6803 | PRIDE | Synechocystis sp. PCC 6803 | LTQ Orbitrap | Dataset with its publication pending | Hao Zhang | | 2013-11-29 |
| PXD000252 | Granzyme M targets topoisomerase II alpha to trigger cell cycle arrest and caspase-dependent apoptosis in cancer cells | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Dataset with its publication pending | Pieter-Jan De Bock | | 2013-11-27 |
| PXD000210 | Proteome analysis by charge state-selective separation of peptides: a multidimensional approach | PRIDE | Mus musculus , Mus musculus (house mouse) | LTQ Orbitrap; instrument model: LTQ-Orbitrap; instrument model: LTQ Orbitrap | Dataset with its publication pending | Pieter-Jan De Bock | | 2013-11-27 |
| PXD000152 | Conservation of the extended substrate specificity profiles among homologous granzymes across species | PRIDE | Mus musculus | instrument model: QToF Global; Waters instrument model | Plasman et al. (2013) | Pieter-Jan De Bock | | 2013-11-27 |
| PXD000563 | Integrated Chromosome 19 Transcriptomic and Proteomic Datasets Derived from Six Glioma-Derived Cancer Stem Cell Lines | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Lichti et al. (2014) | HL Liu | | 2013-11-27 |
| PXD000243 | Telomeric protein composition deriving from q-TIP analysis comparing Hela supertelomerase cells, Hela TRF2 knockdown cells or Hela POT1 knockdown cells with Hela control cells, proteomes by 2D-LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Dataset with its publication pending | Romain Hamelin | | 2013-11-26 |
| PXD000454 | Drosophila melanogaster iTRAQ HCD dataset | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Xing et al. (2014) | Zhang Chengpu | | 2013-11-25 |
| PXD000596 | Probing the complementarity of FAIMS and strong cation exchange chromatography in shotgun proteomics | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Creese et al. (2013) | Andrew Creese | | 2013-11-22 |
| PXD000327 | Quantitative proteomic profiling reveals novel region-specific markers in the adult mouse brain | PRIDE | Mus musculus | LTQ Orbitrap Velos | Dagley et al. (2014) | L Dagley | | 2013-11-22 |
| PXD000483 | Mycobacterium tuberculosis under starvation | PRIDE | Mycobacterium tuberculosis H37Rv | LTQ Orbitrap | Cortes et al. (2013) | Olga Schubert | | 2013-11-22 |
| PXD000238 | Phosphoproteomic Analysis of Lethal Castration Resistant Prostate Cancer Reveals Patient but not Metastatic Site Heterogeneity of Tyrosine Kinase Activation | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Nicholas Graham | | 2013-11-21 |
| PXD000273 | Quantitative proteomics reveals the role of arginine phosphorylation in bacterial stress response | PRIDE | Bacillus subtilis subsp. subtilis str. 168 | LTQ Orbitrap Velos; Q Exactive | Schmidt et al. (2014) | Andreas Schmidt | | 2013-11-21 |
| PXD000489 | A pair of centromeric proteins mediates reproductive isolation in Drosophila species | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap | Thomae et al. (2013) | Andreas Thomae | | 2013-11-20 |
| PXD000387 | LC-MS/MS of gingiva and Periodontal ligaments | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Dataset with its publication pending | Kari Green | | 2013-11-18 |
| PXD000331 | Critical assessment of proteome-wide label-free absolute abundance estimation strategies | PRIDE | Homo sapiens , Mycoplasma pneumoniae, Leptospira interrogans, Drosophila melanogaster (Fruit fly) | LTQ Orbitrap Velos | Ahrné et al. (2013) | Alexander Schmidt | | 2013-11-15 |
| PXD000341 | Site-specific quantitation of TCR-induced phosphorylation in Jurkat T cell lines | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Mogjib SALEK | | 2013-11-15 |
| PXD000478 | Transcriptome and proteome quantification of a tumor model provides novel insights into post-transcriptional gene regulation | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap Velos | Jüschke et al. (2013) | Christoph Jüschke | | 2013-11-14 |
| PXD000575 | Mouse Acrosomal Matrix LC-MS/MS | PRIDE | Mus musculus | LTQ XL | Guyonnet et al. (2012) | Dr Gail A Cornwall | | 2013-11-14 |
| PXD000461 | Identification of telomere-binding proteins by enChIP-MS | PRIDE | Mus musculus | LTQ Orbitrap Velos; instrument model: LTQ Orbitrap velos | Fujita et al. (2013) | Kazunobu Saito | | 2013-11-12 |
| PXD000429 | The Aeromonas salmonicida subsp. salmonicida exoproteome. | PRIDE | Aeromonas salmonicida salmonicida | instrument model: ESI-LTQ-Orbitrap | Vanden Bergh et al. (2013) | Cedric Simillion | | 2013-11-11 |
| PXD000360 | 3xMBT pull-down from wild-type and Rkm1 knock-out yeast | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | LTQ Orbitrap Elite | Dataset with its publication pending | Scott Carlson | | 2013-11-11 |
| PXD000361 | 3xMBT protein pull-down | PRIDE | Homo sapiens | LTQ Orbitrap Velos; Q Exactive; LTQ Orbitrap Elite | Moore et al. (2013) | Scott Carlson | | 2013-11-11 |
| PXD000280 | Arabidopsis thaliana Cytochrome c Novel Partners Identification by LTQ | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | instrument model: LTQ; LTQ | Dataset with its publication pending | Jonathan Martinez Fabregas | | 2013-11-11 |
| PXD000440 | Qualitatively Different T Cell Phenotypic Responses to IL-2 versus IL-15 are Unified by Identical Dependences on Receptor Signal Strength and Duration | PRIDE | Homo sapiens | instrument model: Orbitrap Elite CID/HCD | Arneja et al. (2014) | Hannah Johnson | | 2013-11-07 |
| PXD000355 | Proteomic identification of rainbow trout sperm proteins | PRIDE | Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri) | instrument model: LTQ; LTQ | Nynca et al. (2014) | Joanna Nynca | | 2013-11-05 |
| PXD000423 | Resolution of the type material of the Asian elephant, Elephas maximus (Proboscidea: Elephantidae) Linnaeus, 1758 | PRIDE | Loxodonta africana (African elephant) | Q Exactive | Dataset with its publication pending | Enrico Cappellini | | 2013-11-04 |
| PXD000553 | Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum | PRIDE | Plasmodium falciparum | LTQ | Bunnik et al. (2013) | Anita Saraf | | 2013-10-31 |
| PXD000162 | Hypoxia-induced Changes in the Secretome of Human Preadipocytes and Adipocytes | PRIDE | Homo sapiens | 4800 Proteomics Analyzer; instrument model: absciex 4800; instrument model: IonTrap XCT Ultra | Rosenow et al. (2013) | Jean-Paul Noben | | 2013-10-29 |
| PXD000053 | Lotus japonicus phosphopeptide | PRIDE | Lotus japonicus | LTQ Orbitrap; instrument model: LTQ Orbitrap | Ino et al. (2014) | Yoko Ino | | 2013-10-29 |
| PXD000426 | Asn3 mass accuracy jurkat proteome | PRIDE | Homo sapiens | instrument model: LTQ-Orbitrap Velos; LTQ Orbitrap Velos | Staes et al. (2013) | An Staes | | 2013-10-22 |
| PXD000403 | Sphingomonas wittichii RW1 shotgun proteomics | PRIDE | Sphingomonas wittichii | LTQ Orbitrap; instrument model: LTQ Orbitrap | Hartmann & Armengaud (2014) | Jean ARMENGAUD | | 2013-10-22 |
| PXD000524 | Modified cytosine binding proteins | PRIDE | Mus musculus | LTQ Orbitrap Velos | Dataset with its publication pending | David Oxley | | 2013-10-21 |
| PXD000345 | Proteomic analysis of the global response of an arthropod Wolbachia symbiont to doxycycline-induced stress | PRIDE | Wolbachia sp. wMelPop | LTQ Orbitrap Velos; instrument model: LTQ Orbitrap velos; instrument model: Thermo Orbitrap Velos | Dataset with its publication pending | Stuart Armstrong | | 2013-10-21 |
| PXD000378 | Functional analysis of the rodent tau mutation in a marine unicellular alga | PRIDE | Ostreococcus tauri | instrument model: OrbitrapXL; instrument model: IonTrap XCT Ultra | Dataset with its publication pending | Thierry Le Bihan | | 2013-10-18 |
| PXD000246 | Human breast cancer cell line LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Dataset with its publication pending | Jacob Kennedy | | 2013-10-18 |
| PXD000308 | Shotgun label-free quantitative proteomics of water-deficit stressed mid-mature peanut (Arachis hypogaea L.) seed | PRIDE | Arachis hypogaea | LTQ | Dataset with its publication pending | Masoud zabet-moghaddam | | 2013-10-17 |
| PXD000352 | Proteomic of spearmint (Mentha spicata L.) leaf trichomes | PRIDE | Mentha spicata | 4800 Proteomics Analyzer | Champagne & Boutry (2013) | Antoine Champagne | | 2013-10-17 |
| PXD000415 | Human Hippo pathway , LC-MSMS | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Xu Li | | 2013-10-17 |
| PXD000464 | LC-MS data of peptides from p53 isolated by custom immunoaffinity chromatography | PRIDE | Cercopithecus aethiops (Green monkey) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Dataset with its publication pending | David Perlman | | 2013-10-17 |
| PXD000506 | Host-centric proteomics of stool, part 2 of 2 | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Lichtman et al. (2013) | Joshua S. Lichtman | | 2013-10-16 |
| PXD000240 | Host-centric proteomics of stool | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap Velos | Lichtman et al. (2013) | Joshua Lichtman | | 2013-10-16 |
| PXD000346 | Protein Expression Profile of PBMC from CA and OP patient samples | PRIDE | Homo sapiens | TripleTOF 5600 | Dataset with its publication pending | Minlin Ou | | 2013-10-11 |
| PXD000508 | Ultra high resolution linear ion trap Orbitrap mass spectrometer (Orbitrap Elite) facilitates top down LC MS/MS and versatile peptide fragmentation modes | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Michalski et al. (2012) | Mario Oroshi | | 2013-10-10 |
| PXD000263 | Proteome analysis of the MO3.13 cell line from human oligodendrocytes | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Iwata et al. (2013) | Daniel Martins-de-Souza | | 2013-10-09 |
| PXD000488 | Comparative Proteomic profiling of the rostral band of LAL muscle from SMA mice and litter mate controls | PRIDE | Mus musculus | instrument model: LTQ Orbitrap XL; LTQ Orbitrap XL | Dataset with its publication pending | Douglas Lamont | | 2013-10-09 |
| PXD000500 | Arabidopsis mitochondrial proteome during a diurnal cycle | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | instrument model: IonTrap XCT Ultra | Lee, Eubel & Millar (2010) | Chun Pong Lee | | 2013-10-09 |
| PXD000393 | Multi-omic analysis of Yersinia response to temperature shift | PRIDE | Yersinia pseudotuberculosis, Yersinia pestis | LTQ; LTQ Orbitrap Velos | Dataset with its publication pending | Matthew Monroe | | 2013-10-07 |
| PXD000392 | Salmonella growth condition adaptation | PRIDE | Salmonella typhimurium (strain 14028s / SGSC 2262) | LTQ Orbitrap | Dataset with its publication pending | Matthew Monroe | | 2013-10-07 |
| PXD000391 | Salmonella secretome analysis | PRIDE | Salmonella typhimurium (strain 14028s / SGSC 2262) | LTQ Orbitrap | Dataset with its publication pending | Matthew Monroe | | 2013-10-07 |
| PXD000390 | Systems analysis of Salmonella regulatory mutants | PRIDE | Salmonella typhimurium (strain 14028s / SGSC 2262) | LTQ Orbitrap | Dataset with its publication pending | Matthew Monroe | | 2013-10-07 |
| PXD000389 | Time course response of macrophages to Salmonella infection | PRIDE | Salmonella typhimurium (strain 14028s / SGSC 2262) | LTQ Orbitrap | Dataset with its publication pending | Matthew Monroe | | 2013-10-07 |
| PXD000388 | Subcellular proteomic survey of Salmonella | PRIDE | Salmonella typhimurium (strain 14028s / SGSC 2262) | LTQ Orbitrap | Brown et al. (2012) | Matthew Monroe | | 2013-10-07 |
| PXD000324 | Signatures for Mass Spectrometry Data Quality, part 5 of 5 | PRIDE | Shewanella oneidensis (strain MR-1) | LTQ Orbitrap Velos | Amidan et al. (2014) | Matthew Monroe | | 2013-10-04 |
| PXD000323 | Signatures for Mass Spectrometry Data Quality, part 4 of 5 | PRIDE | Shewanella oneidensis (strain MR-1) | LTQ Orbitrap Velos | Amidan et al. (2014) | Matthew Monroe | | 2013-10-04 |
| PXD000322 | Signatures for Mass Spectrometry Data Quality, part 3 of 5 | PRIDE | Shewanella oneidensis (strain MR-1) | Exactive; Q Exactive | Amidan et al. (2014) | Matthew Monroe | | 2013-10-04 |
| PXD000321 | Signatures for Mass Spectrometry Data Quality, part 2 of 5 | PRIDE | Shewanella oneidensis (strain MR-1) | LTQ Orbitrap | Amidan et al. (2014) | Matthew Monroe | | 2013-10-03 |
| PXD000320 | Signatures for Mass Spectrometry Data Quality, part 1 of 5 | PRIDE | Shewanella oneidensis (strain MR-1) | LTQ Velos; LTQ; LTQ XL ETD | Amidan et al. (2014) | Matthew Monroe | | 2013-10-03 |
| PXD000163 | Anti-FLAG-affinity purification of Umbrea associated factors | PRIDE | Drosophila melanogaster (Fruit fly) | LTQ Orbitrap | Dataset with its publication pending | Andreas Thomae | | 2013-10-03 |
| PXD000399 | Quantitative LC-MS/MS Analysis of Apical Membrane Proteome of mpkCCD Cells | PRIDE | Mus musculus | LTQ Orbitrap | Loo et al. (2013) | Ming-Jiun Yu | | 2013-10-02 |
| PXD000187 | Extra-cellular proteins from Lactic Acid Bacteria | PRIDE | Firmicutes (gram-positive bacteria) | instrument model: IonTrap XCT Ultra | Butler È et al. (2013) | Eile Butler | | 2013-10-01 |
| PXD000419 | Comparative Proteomics in Primates | PRIDE | Macaca mulatta (Rhesus macaque), Homo sapiens , Pan troglodytes | LTQ Orbitrap Velos | Khan et al. (2013) | Zia Khan | | 2013-10-01 |
| PXD000065 | HiRIEF deep proteomics of A431 human vulvar cancer cell line and N2A mouse neuroblastoma cell line | PRIDE | Homo Sapiens , Mus musculus | LTQ Orbitrap | Branca et al. (2014) | Rui Branca | | 2013-09-27 |
| PXD000385 | Amniocyte lysate proteome | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Cho et al. (2013) | E Diamandis | | 2013-09-27 |
| PXD000343 | SWATH analysis of 1433B_HUMAN affinity purifications from HEK293 cells after time course treatment with IGF1 | PRIDE | Homo sapiens | TripleTOF 5600 | Collins et al. (2013) | Ben Collins | | 2013-09-25 |
| PXD000431 | Identifcation of Adiponectin and Evidence for Post-Translational Modifications in the Bottlenose Dolphin (Tursiops truncatus) | PRIDE | Tursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus) | TripleTOF 5600 | Dataset with its publication pending | Benjamin Neely | | 2013-09-23 |
| PXD000444 | OOP and PreP peptide cleavage products by LC-MS | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap | Dataset with its publication pending | Rui Branca | | 2013-09-18 |
| PXD000386 | Extracellular Matrix Proteome | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | Christian Niehage | | 2013-09-12 |
| PXD000168 | mouse microglia using High-pH fractionation and LC-MS/MS | PRIDE | Mus musculus | Q Exactive | Dataset with its publication pending | Dohyun Han | | 2013-09-11 |
| PXD000105 | An extensive proteome map of tomato (Solanum lycopersicum) fruit pericarp | PRIDE | Solanum lycopersicum (Lycopersicon esculentum) | LTQ | Xu et al. (2013) | Mathilde Causse | | 2013-09-11 |
| PXD000328 | Protein synthesis rate is the predominant regulator of protein expression during differentiation | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap; LTQ Orbitrap Velos | Kristensen, Gsponer & Foster (2013) | Anders Kristensen | | 2013-09-10 |
| PXD000084 | Honey Bee Proteome Atlas | PRIDE | Apis mellifera ligustica (Common honeybee) (Italian honeybee) | LTQ Orbitrap: MS | Chan et al. (2013) | Queenie Chan | | 2013-09-10 |
| PXD000420 | Human alveolar bone and dental cementum LC-MSMS | PRIDE | Homo sapiens | LTQ FT | Salmon et al. (2013) | Cristiane R. Salmon | | 2013-09-09 |
| PXD000417 | Arabidopsis cell LC-MSMS | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Sun et al. (2013) | Takeo Sato | | 2013-09-06 |
| PXD000449 | Chr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. CCD18 Cell line. | PRIDE | Homo sapiens | dissociation method; collision gas; collision gas; dissociation method | Segura et al. (2013) | Alberto Medina-Aunon | | 2013-09-06 |
| PXD000023 | EHEC O157:H7 Sakai vs. TW14359: Secreted and Cytosolic iTRAQ; sepD secretome analysis of TW14359 | PRIDE | Escherichia coli O157:H7 (strain TW14359 / EHEC) | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Morgan et al. (2013) | Jason Morgan | | 2013-09-05 |
| PXD000447 | Chr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. Ramos Cell line. | PRIDE | Homo sapiens | collision gas; collision gas | Segura et al. (2013) | Alberto Medina-Aunon | | 2013-09-05 |
| PXD000443 | Chr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. Jurkat Cell line. | PRIDE | Homo Sapiens, Homo sapiens | collision gas; dissociation method | Segura et al. (2013) | Alberto Medina-Aunon | | 2013-09-05 |
| PXD000442 | Chr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. MCF7 Cell line. | PRIDE | Homo Sapiens, Homo sapiens | dissociation method; dissociation method; collision gas; collision gas; dissociation method | Segura et al. (2013) | Alberto Medina-Aunon | | 2013-09-04 |
| PXD000359 | SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers | PRIDE | Homo sapiens | LTQ Orbitrap | Zanivan et al. (2013) | Sara Zanivan | | 2013-09-04 |
| PXD000182 | Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channel SLAH3 | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap Velos | Demir et al. (2013) | Waltraud Schulze | | 2013-09-02 |
| PXD000430 | in Vitro Brominated Peptides Spiked into U373 cell digestion | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Dataset with its publication pending | HL Liu | | 2013-08-28 |
| PXD000052 | SLP76 interactome in resting and activated primary mast cells | PRIDE | Mus musculus | LTQ Orbitrap Velos | Bounab et al. (2013) | Hesse Anne-Marie | | 2013-08-28 |
| PXD000067 | U1 Small Nuclear Ribonucleoprotein Complex and RNA Splicing Alterations in Alzheimer Disease | PRIDE | Homo sapiens | LTQ Orbitrap | Bai et al. (2013) | Junmin Peng | | 2013-08-28 |
| PXD000035 | Surface Proteins of Listeria monocytogenes | PRIDE | Listeria monocytogenes | MALDI Synapt HDMS; instrument model: Waters Synapt HDMS QTOF | Zhang et al. (2013) | Min Lin | | 2013-08-27 |
| PXD000278 | Quantitative proteomic analysis of breast cancer tissues | PRIDE | Homo sapiens | LTQ Orbitrap | Liu et al. (2013) | Ning Qing Liu | | 2013-08-23 |
| PXD000418 | Defining, Comparing, and Improving iTRAQ Quantification in Mass Spectrometry Proteomics Data | PRIDE | Homo sapiens | 4800 Proteomics Analyzer; 6520 Quadrupole Time-of-Flight LC/MS; LTQ Orbitrap Velos | Hultin-Rosenberg et al. (2013) | Henrik J Johansson | | 2013-08-16 |
| PXD000073 | Terminal alkynes react with active-site cysteine nucleophiles | PRIDE | Mus musculus | instrument model: LTQ Orbitrap Velos; instrument model: LTQ Orbitrap Discovery; LTQ Orbitrap Discovery; LTQ Orbitrap Velos | Ekkebus et al. (2013) | Patrick Wijten | | 2013-08-14 |
| PXD000264 | Temperature-dependent Proteome Study of Thermoanaerobacter tengcongensis | PRIDE | Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Caldanaerobacter subterraneus subsp. tengcongensis) | instrument model: LTQ Orbitrap Velos; LTQ Orbitrap; LTQ Orbitrap Velos; instrument model: LTQ Orbitrap | Chen et al. (2013) | Bo Wen | | 2013-08-13 |
| PXD000411 | Proteomics of protein secretion by Aggregatibacter actinomycetemcomitans | PRIDE | Aggregatibacter actinomycetemcomitans D7S-1 | instrument model: Bruker HCT ultra ETDII; Bruker Daltonics HCT Series | Zijnge, Kieselbach & Oscarsson (2012) | Thomas Kieselbach | | 2013-08-13 |
| PXD000197 | AKT2 interacting proteins_ MBP- and MAP-TAPs | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Bottermann et al. (2013) | Katharina Bottermann | | 2013-08-13 |
| PXD000030 | Annexin A1 interacting proteins in chronic myeloid leukemia KCL22 cells | PRIDE | Homo sapiens , Homo sapiens | instrument model: IonTrap XCT Ultra | Colavita et al. (2013) | Irene Colavita | | 2013-08-13 |
| PXD000335 | VHL Cancer | PRIDE | Homo sapiens | instrument model: LTQFT | Dataset with its publication pending | Laszlo Prokai | | 2013-08-12 |
| PXD000258 | Proteomic response of Alicycliphilus denitrificans strain BC towards the different electron acceptors chlorate, nitrate and oxygen. | PRIDE | Alicycliphilus denitrificans (strain JCM 14587 / BC) | LTQ Orbitrap | Oosterkamp et al. (2013) | Sjef Boeren | | 2013-08-12 |
| PXD000409 | System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | Q Exactive | Nagaraj et al. (2012) | Mario Oroshi | | 2013-08-09 |
| PXD000292 | ChaFRADIC: A novel SCX-based approach for N-terminal Enrichment | PRIDE | Saccharomyces cerevisiae (Baker's yeast) | Q Exactive | Dataset with its publication pending | Saskia Venne | | 2013-08-09 |
| PXD000189 | Searching for Pseudomonas aeruginosa MagD partners | PRIDE | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | instrument model: LTQ-Orbitrap Velos pro; LTQ Orbitrap Velos | Robert-Genthon et al. (2013) | Yohann Couté | | 2013-08-09 |
| PXD000247 | Proteomic analysis of the testa from developing soybean seeds | PRIDE | Glycine max (Glycine hispida) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Miernyk & Johnston (2013) | Jan Miernyk | | 2013-08-09 |
| PXD000047 | Endogenous Purification Reveals GREB1 as a Key Estrogen Receptor Regulatory Factor | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Mohammed et al. (2013) | Hisham Mohammed | | 2013-08-09 |
| PXD000254 | DMSO enhances electrospray response boosting sensitivity of proteomic experiments | PRIDE | Homo sapiens | LTQ Orbitrap; LTQ Orbitrap Velos; LTQ Orbitrap Elite | Hahne et al. (2013) | Hannes Hahne | | 2013-08-07 |
| PXD000313 | Quantitative proteomics study on rice embryo during embryogenesis by using isobaric tags for relative and absolute quantification (iTRAQ) | PRIDE | Oryza sativa | Q Exactive | Dataset with its publication pending | Jin Zi | | 2013-08-06 |
| PXD000095 | Determination of Phosphorylation Sites in the DivIVA Protein of Streptomyces coelicolor by Targeted LC-MS/MS | PRIDE | Streptomyces coelicolor | LTQ Orbitrap; instrument model: LTQ Orbitrap | Saalbach et al. (2013) | Gerhard Saalbach | | 2013-08-05 |
| PXD000174 | CaMKII Cardiac Phosphoproteome | PRIDE | Mus musculus | LTQ Orbitrap Velos | Scholten et al. (2013) | Arjen Scholten | | 2013-08-02 |
| PXD000064 | The conserved set of host proteins incorporated into HIV-1 virions suggests a common egress pathway in multiple cell types | PRIDE | Homo sapiens , Human immunodeficiency virus 1 | LCQ Classic; Applied Biosystems instrument model | Linde et al. (2013) | Ceereena Ubaida Mohien | | 2013-08-02 |
| PXD000265 | Oryza sativa egg, sperm, callus, pollen and seedling proteome | PRIDE | Oryza sativa | instrument model: LTQ Orbitrap XL; LTQ Orbitrap XL | Abiko et al. (2013) | Masato Taoka | | 2013-08-02 |
| PXD000342 | SILAC dat for two TERRA pull-down experiments using different salt conditions (1 M NaCl and 250 mM NaCl) | PRIDE | Homo sapiens | LTQ Orbitrap | Dataset with its publication pending | F Butter | | 2013-08-02 |
| PXD000054 | Proteogenomic analysis of Helicobacter pylori strain 26695 | PRIDE | Helicobacter pylori 26695 | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Müller et al. (2013) | Stephan Mueller | | 2013-08-01 |
| PXD000373 | KLK assay for PCa plasma samples (Nilsson, et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Nilsson et al. (2013) | Akos Vegvari | Gyorgy Marko-Varga | 2013-07-26 |
| PXD000372 | Bovine mastitis host-repsonse (Bislev et al.) | PeptideAtlas | Bos taurus | QTRAP 5500 | Bislev et al. (2012) | Stine Bislev | Emoke Bendixen | 2013-07-26 |
| PXD000371 | Quantif. nucleoporins in HeLa nuclear env. extracts (Ori, et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Ori et al. (2013) | Alessandro Ori | Martin Beck | 2013-07-26 |
| PXD000370 | Quantification of human nuclear pore complex composition in five cell lines (Ori, et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Ori et al. (2013) | Alessandro Ori | Martin Beck | 2013-07-26 |
| PXD000369 | pre-60S particles at different maturation stages (Altvater, et al.) | PeptideAtlas | Saccharomyces cerevisiae | QTRAP 5500 | Altvater et al. (2012) | Andre Melnik | Paola Picotti | 2013-07-26 |
| PXD000225 | Phosphoproteomics study on protein kinase C delta induced cell death | PRIDE | Homo sapiens | LTQ Orbitrap | Xia et al. (2013) | Li Xia | | 2013-07-26 |
| PXD000132 | Analysis of lung cancer cell lines GLC1 and GLC1 M13 | PRIDE | Homo sapiens | instrument model: ultraflex TOF/TOF; Bruker Daltonics flex series | Poschmann et al. (2013) | Gereon Poschmann | | 2013-07-26 |
| PXD000148 | Quantitative proteomics profiling of protein kinase A substrates - Jurkat clone E6.1 | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Giansanti et al. (2013) | Piero Giansanti | | 2013-07-25 |
| PXD000283 | Comparison and applications of label-free absolute proteome quantification methods on Escherichia coli | PRIDE | Escherichia coli | LTQ Orbitrap; instrument model: LTQ Orbitrap | Arike et al. (2012) | Liisa Arike | | 2013-07-24 |
| PXD000190 | Quantitative Proteomics of miR-148a in gastric cancer cells | PRIDE | Homo sapiens | instrument model: synapt G2 HDMS; MALDI Synapt G2 HDMS; instrument model: Q-TOF | Hu et al. (2013) | Chia-Wei Hu | | 2013-07-24 |
| PXD000281 | Retinoic acid receptor alpha is associated with tamoxifen resistance in breast cancer | PRIDE | Homo sapiens | Agilent instrument model; 4800 Proteomics Analyzer; LTQ Orbitrap | Johansson et al. (2013) | Henrik J Johansson | | 2013-07-24 |
| PXD000050 | The human islet of Langerhans proteome database | PRIDE | Homo sapiens | instrument model: Thermo Scientific LTQ Orbitrap Velos; LTQ Orbitrap Velos | Dataset with its publication pending | Domitille Schvartz | | 2013-07-23 |
| PXD000271 | Mouse gastrointestinal system mucus nLC-MS/MS | PRIDE | Mus musculus | LTQ Orbitrap | Rodríguez-Piñeiro et al. (2013) | Ana M. Rodriguez-Pineiro | | 2013-07-23 |
| PXD000262 | Characterisation of PRR11 | PRIDE | Homo sapiens | LTQ Orbitrap | Larance et al. (2013) | Vackar Afzal | | 2013-07-23 |
| PXD000126 | Prototheca zopfii genotype proteomics analysis | PRIDE | Prototheca zopfii, Chlorella-like algae | instrument model: MALDI UltraFlex; Bruker Daltonics flex series | Murugaiyan et al. (2013) | Jayaseelan Murugaiyan | | 2013-07-22 |
| PXD000213 | Pandoravirus proteome | PRIDE | unidentified | instrument model: LTQ-Orbitrap Velos pro; LTQ Orbitrap Velos | Philippe et al. (2013) | Yohann Couté | | 2013-07-19 |
| PXD000147 | Proteomics Analysis of Burkholderia Kirkii | PRIDE | Candidatus Burkholderia kirkii | LTQ Orbitrap XL | Carlier et al. (2013) | Ulrich Omasits | | 2013-07-18 |
| PXD000153 | Complete Expressed Proteome of Bartonella Henselae | PRIDE | Bartonella henselae (strain ATCC 49882 / Houston 1) (Rochalimaea henselae) | LTQ Orbitrap; LTQ FT | Omasits et al. (2013) | Ulrich Omasits | | 2013-07-18 |
| PXD000270 | Proteome of Burkholderia cenocepacia H111 in aerobic and micro-oxia condition | PRIDE | Burkholderia cenocepacia H111 | LTQ Orbitrap | Dataset with its publication pending | Ulrich Omasits | | 2013-07-18 |
| PXD000183 | Human kidney primary proximal tubule cell LC-MSMS | PRIDE | Homo sapiens | LTQ Orbitrap | Konvalinka et al. (2013) | Ana Konvalinka | | 2013-07-18 |
| PXD000194 | Proteomics analysis of human pericardial fluid | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Xiang et al. (2013) | fei xiang | | 2013-07-09 |
| PXD000224 | Protein extraction in recalcitrant plant species | PRIDE | Vitis vinifera , Quercus suber (Cork oak), Pinus pinaster (Maritime pine), Pisolithus tinctorius Marx 270 | 4700 Proteomics Analyzer | Sebastiana et al. (2013) | Andreia Figueiredo | | 2013-07-09 |
| PXD000107 | Pseudomonas aeruginosa inner membrane proteome | PRIDE | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | instrument model: LTQ-Orbitrap Velos pro; LTQ Orbitrap Velos | Casabona et al. (2013) | Yohann Couté | | 2013-07-04 |
| PXD000049 | Comparative phosphoproteome of Trypanosoma brucei bloodstream & procyclic form | PRIDE | Trypanosoma brucei | LTQ Orbitrap Velos | Urbaniak, Martin & Ferguson (2013) | Michael Urbaniak | | 2013-07-03 |
| PXD000125 | Comprehensive identification of proteins from MALDI imaging | PRIDE | Homo sapiens | LTQ Orbitrap; LTQ Orbitrap Elite | Maier et al. (2013) | Stefan K Maier | | 2013-07-03 |
| PXD000317 | Rice embryogenesis proteins quantification (Zi) | PeptideAtlas | Oryza sativa | QTRAP 5500 | Zi et al. (2013) | Jin Zi | Siqi Liu | 2013-07-02 |
| PXD000309 | Proteomic portrait of human breast cancer progression identifies novel prognostic markers | PRIDE | Homo sapiens | LTQ Orbitrap | Geiger et al. (2012) | Mario Oroshi | | 2013-07-02 |
| PXD000235 | bHLH Transcription Factors that Facilitate K+ Uptake During Stomatal Opening are Repressed by Abscisic Acid through Phosphorylation | PRIDE | Arabidopsis thaliana (thale cress) | instrument model: LTQ; LTQ | Takahashi et al. (2013) | Yohei Takahashi | | 2013-06-28 |
| PXD000231 | Mouse Cochlea Sensory Epithelium Proteome | PRIDE | Mus musculus | LTQ Orbitrap | Darville & Sokolowski (2013) | Lancia Darville | | 2013-06-28 |
| PXD000045 | LC-MS/MS of cultured Mycobacterium tuberculosis in a hypoxia/reaeration timecourse | PRIDE | Mycobacterium tuberculosis | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Galagan et al. (2013) | Gingras Olivier | | 2013-06-25 |
| PXD000069 | Shotgun proteomics of Ophrys orchid flowers | PRIDE | Ophrys exaltata subsp. archipelagi (Ophrys arachnitiformis subsp. archipelagi), Ophrys garganica, Ophrys sphegodes (Early spider orchid) (Arachnites aranifera) | LTQ; instrument model: LTQ_1 FGCZ | Sedeek et al. (2013) | Philipp Schlueter | | 2013-06-24 |
| PXD000121 | Proteomic Profiling of the Mitochondrial Inner Membrane of Rat Renal Proximal Convoluted Tubules | PRIDE | Rattus norvegicus | LTQ | Freund, Prenni & Curthoys (2013) | Dana Freund | | 2013-06-20 |
| PXD000284 | Comparative proteomic analysis of human bile from malignant and nonmalignant biliary stenosis | PRIDE | Homo sapiens | LTQ Orbitrap | Farina et al. (2014) | Annarita Farina | | 2013-06-20 |
| PXD000188 | Profiling protein kinases and other ATP binding proteins in Arabidopsis using acyl-ATP probes | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ | Villamor et al. (2013) | Thomas Colby | | 2013-06-19 |
| PXD000290 | Human liver HALT-C (Qin et al.) | PeptideAtlas | Homo sapiens | 6460 Triple Quadrupole LC/MS | Qin et al. (2012) | Shizhen Qin | Leroy Hood | 2013-06-18 |
| PXD000151 | Adaptation of a commonly used, chemically defined medium for human embryonic stem cells to stable isotope labeling with amino acids in cell culture (SILAC) | PRIDE | Homo sapiens | Q Exactive | Liberski et al. (2013) | Johannes Graumann | | 2013-06-17 |
| PXD000208 | AP-MS analysis of human histone deacetylase interactions in CEM-T cells | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Joshi et al. (2013) | T Greco | | 2013-06-14 |
| PXD000276 | Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells | PRIDE | Schizosaccharomyces pombe (Fission yeast) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Marguerat et al. (2012) | Alexander Schmidt | | 2013-06-06 |
| PXD000239 | Characterization of the novel broad-spectrum kinase inhibitor CTx-0294885 as an affinity reagent for mass spectrometry-based kinome profiling | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Zhang et al. (2013) | Luxi Zhang | | 2013-06-05 |
| PXD000076 | Shortgun Proteomic analysis of two Bartonella quintana strains | PRIDE | Bartonella quintana JK 31, Bartonella quintana (Rochalimaea quintana) | instrument model: QSTAR-XL; QSTAR XL | Fabietti et al. (2013) | Shibu Krishnan | | 2013-06-03 |
| PXD000250 | Chlorella vulgaris UTEX 395 Shotgun Proteomic Time Course Analysis Under Nitrogen Deprivation | PRIDE | Chlorella vulgaris (Green alga) | LTQ Orbitrap Velos | Guarnieri et al. (2013) | Michael Guarnieri | | 2013-06-03 |
| PXD000230 | Membrane enriched proteome of transfected SW480 cells | PRIDE | Homo sapiens | LTQ | Cantor et al. (2013) | David Cantor | | 2013-05-30 |
| PXD000195 | Arabidopsis root hair protoplasts | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap | Lan et al. (2013) | Ping Lan | | 2013-05-28 |
| PXD000129 | Drosophila immune response | PRIDE | Drosophila melanogaster (Fruit fly) | instrument model: LTQ; instrument model: LTQ FT Ultra; LTQ; LTQ FT Ultra | Fukuyama et al. (2013) | Yann Verdier | | 2013-05-22 |
| PXD000236 | Dynamic Msn2 phosphorylation changes in yeast (Sunnaker, et al.) | PeptideAtlas | Saccharomyces cerevisiae | TSQ Vantage | Sunnåker et al. (2013) | Christina Ludwig | Ruedi Aebersold | 2013-05-17 |
| PXD000259 | Regulation of DosR regulon (Schubert) | PeptideAtlas | Mycobacterium tuberculosis | TSQ Vantage | Schubert et al. (2013) | Olga Schubert | Ruedi Aebersold | 2013-05-16 |
| PXD000256 | M. tuberculosis SRM atlas (Schubert et al.) | PeptideAtlas | Mycobacterium tuberculosis | TSQ Vantage | Schubert et al. (2013) | Olga Schubert | Ruedi Aebersold | 2013-05-16 |
| PXD000109 | ThinPrep Cervical Smear iTRAQ LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Papachristou et al. (2013) | Theodoros Roumeliotis | | 2013-05-09 |
| PXD000138 | Synthetic (Phospho)Peptide Library | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Marx et al. (2013) | Simone Lemeer | | 2013-05-05 |
| PXD000211 | Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channnel SLAH3 | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | instrument model: LCQ Duo; instrument model: qSTAR | Demir et al. (2013) | Yvonne Reinders | | 2013-05-02 |
| PXD000172 | Quantitative dissection and stoichiometry determination of the human SET1/MLL histone methyltransferase complexes | PRIDE | Homo sapiens | LTQ Orbitrap Velos | van Nuland et al. (2013) | A.H. Smits | | 2013-05-02 |
| PXD000165 | Analysis of botrytis cinerea mycelium proteins | PRIDE | Botryotinia fuckeliana (strain T4) (Noble rot fungus) (Botrytis cinerea), Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea) | 4800 Proteomics Analyzer; Synapt MS | Gonzalez-Fernandez et al. (2013) | Kerman Aloria | | 2013-05-02 |
| PXD000158 | Characterization of the Cardiac Myosin Binding Protein-C Phosphoproteome in Healthy and Failing Human Hearts | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap; LTQ Orbitrap Elite | Kooij et al. (2013) | Ronald Holewinski | | 2013-05-01 |
| PXD000222 | Comparative Phosphoproteomic Analysis of G2-checkpoint Recovery | PRIDE | Homo sapiens | instrument model: LTQ; LTQ Orbitrap; LTQ; instrument model: LTQ-Orbitrap MS | Dataset with its publication pending | Teck Yew Low | | 2013-05-01 |
| PXD000217 | Phosphoproteomics data classify haematological cancer cell lines according to tumour type and sensitivity to kinase inhibitors | PRIDE | Homo sapiens , Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Casado et al. (2013) | Pedro Casado-Izquierdo | | 2013-04-26 |
| PXD000083 | Glycosyltransferases from oat (Avena) implicated in the acylation of avenacins | PRIDE | Avena strigosa (black oat) | LTQ Orbitrap; instrument model: LTQ Orbitrap | Owatworakit et al. (2013) | Gerhard Saalbach | | 2013-04-24 |
| PXD000185 | Kinase Substrate Enrichment Analysis Provides Insights into the Heterogeneity of Signaling Pathway Activation in Leukemia Cells | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Casado et al. (2013) | Pedro Casado-Izquierdo | | 2013-04-09 |
| PXD000127 | 15N Limitation of detection in Pseudomonas fluorescens | PRIDE | Pseudomonas fluorescens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Taubert, von Bergen & Seifert (2013) | Jana Seifert | | 2013-04-09 |
| PXD000113 | GeLC-MS/MS analysis of cereal aphid saliva | PRIDE | Metopolophium dirhodum (Rose grain aphid), Sitobion avenae (English grain aphid) | LTQ | Rao, Carolan & Wilkinson (2013) | James Carolan | | 2013-04-09 |
| PXD000141 | Mycobacterium tuberculosis ATP-binding Proteome | PRIDE | Mycobacterium tuberculosis H37Rv | LTQ | Wolfe et al. (2013) | Karen Dobos | | 2013-04-08 |
| PXD000123 | Long term water deficit stress in grapevine | PRIDE | Vitis vinifera | LTQ | Cramer et al. (2013) | Steve Van Sluyter | | 2013-03-25 |
| PXD000120 | Proteogenomic Analysis of Human Colon Carcinoma Cell Lines LIM1215, LIM1899 and LIM2405 | PRIDE | Homo sapiens | LTQ | Fanayan et al. (2013) | Susan Fanayan | | 2013-03-14 |
| PXD000016 | Physiological adaptation of the Rhodococcus jostii RHA1 membrane proteome to steroids as growth substrates | PRIDE | Rhodococcus sp. (strain RHA1) | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Haußmann et al. (2013) | Ansgar Poetsch | | 2013-03-06 |
| PXD000043 | Proteomic profiling of thermal acclimation in Drosophila melanogaster | PRIDE | Drosophila (fruit flies) | instrument model: HCT Ultra PTM Discovery System; Bruker Daltonics HCT Series | Colinet et al. (2013) | Emmanuelle Com | | 2013-03-04 |
| PXD000079 | Formalin-fixed Human Ovarian Cancer Tryptic Peptide LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap | Meding et al. (2013) | Stephan Meding | | 2013-02-28 |
| PXD000124 | mESC shotgun and positional proteomics based on deep proteome sequence database (derived from RIBOseq data) | PRIDE | Mus musculus | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Menschaert et al. (2013) | Gerben Menschaert | | 2013-02-26 |
| PXD000143 | Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives | PRIDE | Mus musculus | LTQ Orbitrap Velos | Spruijt et al. (2013) | A.H. Smits | | 2013-02-26 |
| PXD000036 | Albuminome from human serum and CSF | PRIDE | Homo sapiens | LTQ Orbitrap Elite | Holewinski et al. (2013) | Ronald Holewinski | | 2013-02-25 |
| PXD000157 | Proteome analysis of U2OS whole cell lysates | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ Orbitrap | Beck et al. (2011) | Alexander Schmidt | | 2013-02-22 |
| PXD000008 | Carbon source-induced reprogramming of the cell wall proteome and secretome modulates the adherence and drug resistance of the fungal pathogen Candida albicans | PRIDE | Candida albicans SC5314 | Q-Tof ultima; instrument model: QToF-Ultima | Ene et al. (2012) | Clemens J. Heilmann | | 2013-02-20 |
| PXD000128 | Rat Liver Microsomes by 2D-LC-MS/MS | PRIDE | Rattus norvegicus | TripleTOF 5600 | Golizeh & Sleno (2013) | Lekha Sleno | | 2013-02-19 |
| PXD000150 | MSE vs IM-MSE comparison | PRIDE | Escherichia coli | Synapt MS | Dataset with its publication pending | Yishai Levin | | 2013-02-18 |
| PXD000142 | Streptococcus uberis extracellular proteome | PRIDE | Streptococcus | Bruker Daltonics esquire series; instrument model: Bruker Esquire HCT Plus | Dataset with its publication pending | Anita Jaglarz | | 2013-02-13 |
| PXD000071 | Rapid and deep profiling of human induced pluripotent stem cell proteome by one-shot nanoLC-MS/MS analysis with meter-scale monolithic silica columns | PRIDE | Homo sapiens | TripleTOF 5600 | Yamana et al. (2013) | Mio Iwasaki | | 2013-02-07 |
| PXD000059 | Proteomics of the Milk Fat Globule Membrane from Camelus dromedarius | PRIDE | Camelus dromedarius (Arabian camel) | LTQ Orbitrap | Saadaoui et al. (2013) | HENRY CELINE | | 2013-02-05 |
| PXD000134 | The quantitative proteomes of human-induced pluripotent stem cells and embryonic stem cells | PRIDE | Homo sapiens | LCQ Classic; LTQ Orbitrap Velos | Munoz et al. (2011) | Teck Yew Low | | 2013-02-01 |
| PXD000111 | Mycobacterium tuberculosis culture filtrate LC-MS/MS | PRIDE | Mycobacterium tuberculosis H37Rv | LTQ FT | Albrethsen et al. (2013) | Ida Rosenkrands | | 2013-01-24 |
| PXD000021 | D-score | PRIDE | Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Vaudel et al. (2013) | Lennart Martens | | 2013-01-23 |
| PXD000026 | Analysis of E2F2 interacting proteins | PRIDE | Homo sapiens , Homo sapiens | instrument model: Q-Tof Micro (Waters); Q-Tof micro | Osinalde et al. (2013) | Nerea Osinalde | | 2013-01-21 |
| PXD000044 | Stable isotope labeling with amino acids in mouse xenografts. | PRIDE | Homo sapiens , Mus musculus | LTQ Orbitrap | Dataset with its publication pending | Serge Urbach | | 2013-01-17 |
| PXD000039 | Chr16-HPP.Pilot experiment.JPR HPP Special issue | PRIDE | Human | dissociation method | Segura et al. (2013) | J. Alberto Medina-Aunon | | 2013-01-15 |
| PXD000089 | Proteomic and phosphoproteomic data of colorectal cancer tissues and cells for Chromosome-Centric Human Proteome Project | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Shiromizu et al. (2013) | Takashi Shiromizu | | 2013-01-11 |
| PXD000061 | Proteome-wide purification of O-GlcNAc proteins | PRIDE | Homo sapiens | LTQ Orbitrap; LTQ Orbitrap Velos | Hahne et al. (2013) | Hannes Hahne | | 2013-01-10 |
| PXD000066 | In-depth membrane proteomic study of breast cancer tissues | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Muraoka et al. (2013) | satoshi muraoka | | 2013-01-08 |
| PXD000104 | Chick vestibular hair bundles | PRIDE | Gallus gallus | LTQ Orbitrap Velos | Shin et al. (2013) | Peter Gillespie | | 2013-01-08 |
| PXD000058 | SILAC Osteoblast | PRIDE | Homo sapiens | LTQ Orbitrap | Kliemt et al. (2013) | Stefanie Kliemt | | 2012-12-19 |
| PXD000112 | Zebrafish plasma analyzed by CE- and LC-MS/MS | PRIDE | Danio rerio (Brachydanio rerio) | Bruker Daltonics amaZon series | Dataset with its publication pending | Anthonius A.M. Heemskerk | | 2012-12-18 |
| PXD000094 | Proteogenomics of Tistlia consotensis | PRIDE | Bacteria | LTQ Orbitrap; instrument model: LTQ Orbitrap | Rubiano-Labrador et al. (2014) | Jean ARMENGAUD | | 2012-12-18 |
| PXD000027 | maize leaf ESI-Q-TOF MS | PRIDE | Zea mays | instrument model: ESI-Q-TOF MS | Hu et al. (2013) | Yufeng Hu | | 2012-12-14 |
| PXD000025 | Phosphoproteomic analysis of Rhodopseudomonas palustris | PRIDE | Rhodopseudomonas palustris | LTQ Orbitrap; instrument model: Triple TOF; TripleTOF 5600; instrument model: LTQ Orbitrap | Hu et al. (2012) | Chia-Wei Hu | | 2012-12-12 |
| PXD000101 | Human prostate serum SRM (Cima et al.) | PeptideAtlas | Homo sapiens | 4000 QTRAP | Cima et al. (2011) | Terry Farrah | Ruedi Aebersold | 2012-12-11 |
| PXD000102 | Human urine SRM (Selevsek et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Selevsek et al. (2011) | Terry Farrah | Ruedi Aebersold | 2012-12-11 |
| PXD000100 | Human CAP ovarian cancer plasma (Huettenhain et al.) | PeptideAtlas | Homo sapiens | QTRAP 5500 | Hüttenhain et al. (2012) | Ruth Hüttenhain | Ruedi Aebersold | 2012-12-11 |
| PXD000099 | Yeast phospho site changes in Pda1 Pfk2 Gpd1 (Oliveira, et al.) | PeptideAtlas | Saccharomyces cerevisiae | TSQ Vantage | Oliveira et al. (2012) | Christina Ludwig | Ruedi Aebersold | 2012-12-11 |
| PXD000098 | Label-free quantification of Leptospira (Ludwig et al.) | PeptideAtlas | Leptospira interrogans | TSQ Vantage | Ludwig et al. (2012) | Christina Ludwig | Ruedi Aebersold | 2012-12-11 |
| PXD000097 | dMRM four human chr18 proteins in liver & plasma | PeptideAtlas | Homo sapiens | 6460 Triple Quadrupole LC/MS | Zgoda et al. (2013) | Aleksey Filimonov | Sergei Moshkovskii | 2012-12-11 |
| PXD000096 | RIPchipSRM C. elegans miR58 targets (Jovanovic, et al.) | PeptideAtlas | Caenorhabditis elegans | 4000 QTRAP | Jovanovic et al. (2012) | Lukas Reiter | Michael O. Hengartner | 2012-12-11 |
| PXD000093 | Human Chr18. 23 light endogenous peps for 19 prots (Zgoda, et al.) | PeptideAtlas | Homo sapiens | Agilent 6410 Triple Quad | Zgoda et al. (2013) | Aleksey Filimonov | Alexander Archakov | 2012-12-11 |
| PXD000092 | Human Chr18. 25 light, 17 heavy synth peps for 21 prots (Zgoda, et al.) | PeptideAtlas | Homo sapiens | Agilent 6410 Triple Quad | Zgoda et al. (2013) | Aleksey Filimonov | Alexander Archakov | 2012-12-11 |
| PXD000091 | Human Chr18. 25 light endogenous peps for 21 prots (Zgoda, et al.) | PeptideAtlas | Homo sapiens | Agilent 6410 Triple Quad | Zgoda et al. (2013) | Aleksey Filimonov | Alexander Archakov | 2012-12-11 |
| PXD000048 | Tandem MOAC identifies novel in vivo MAP kinase substrates in Arabidopsis thaliana. | PRIDE | Arabidopsis thaliana (Mouse-ear cress) | LTQ Orbitrap | Hoehenwarter et al. (2013) | Volker Egelhofer | | 2012-12-11 |
| PXD000004 | Identification and quantification of human postmortem frontal cortex proteome with a SILAM mouse brain standard | PRIDE | Homo sapiens | instrument model: QExactive; Q Exactive | MacDonald et al. (2012) | Matthew L. MacDonald | | 2012-12-10 |
| PXD000088 | Human CAP urine (Huettenhain et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Hüttenhain et al. (2012) | Ruth Hüttenhain | Ruedi Aebersold | 2012-12-06 |
| PXD000087 | Human CAP crude plasma (Huettenhain et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Hüttenhain et al. (2012) | Ruth Hüttenhain | Ruedi Aebersold | 2012-12-06 |
| PXD000086 | Human CAP depleted plasma (Huettenhain et al.) | PeptideAtlas | Homo sapiens | TSQ Vantage | Hüttenhain et al. (2012) | Ruth Hüttenhain | Ruedi Aebersold | 2012-12-06 |
| PXD000085 | Human Chr18. 25 synthetic peptides for 21 proteins (Zgoda, et al.) | PeptideAtlas | Homo sapiens | Agilent 6410 Triple Quad | Zgoda et al. (2013) | Aleksey Filimonov | Alexander Archakov | 2012-12-06 |
| PXD000042 | Human plasma LC-MS/MS | PRIDE | Homo sapiens | Bruker Daltonics amaZon series | Dataset with its publication pending | Ekaterina Mostovenko | | 2012-12-05 |
| PXD000062 | A bioinformatics approach for integrated transcriptomic and proteomic comparative analyses of model and non-sequenced anopheline vectors of human malaria parasites | PRIDE | Albimanus | 6520 Quadrupole Time-of-Flight LC/MS | Ubaida Mohien et al. (2013) | Ceereena Ubaida Mohien | | 2012-11-02 |
| PXD000031 | Purified FLAG-Hrp1 GeLC-MS/MS | PRIDE | Schizosaccharomyces pombe (Fission yeast) | LTQ Orbitrap Velos | Pointner et al. (2012) | Punit Prasad | | 2012-11-01 |
| PXD000056 | Cyanophora paradoxa muroplast LC-MSMS | PRIDE | Cyanophora paradoxa | LTQ Orbitrap | Facchinelli et al. (2013) | Fabio Facchinelli | | 2012-10-30 |
| PXD000009 | Discovery and identification of potential markers of Childhood Absence Epilepsy by MALDI imaging mass spectrometry | PRIDE | Mus musculus | LTQ Orbitrap | Lagarrigue et al. (2012) | Mélanie Lagarrigue | | 2012-09-24 |
| PXD000028 | HIgh fat refined sugar diet and hippocampus | PRIDE | Rattus norvegicus | LTQ | Dataset with its publication pending | Heather Francis | | 2012-09-14 |
| PXD000012 | Resveratrol-induced changes of the human adipocyte secretion profile. | PRIDE | Homo sapiens | instrument model: LCQ Duo | Rosenow et al. (2012) | Jean-Paul Noben | | 2012-08-31 |
| PXD000017 | Analysis of the rat hypothalamus proteome by data independent label-free liquid chromatography tandem mass spectrometry | PRIDE | Rattus norvegicus | microchannel plate detector; Q-TOF Premier; ACQUITY UPLC; electrospray ionization | Stelzhammer et al. (2012) | Viktoria Stelzhammer | | 2012-08-23 |
| PXD000013 | iQUARI | PRIDE | Pyrococcus furiosus, Homo sapiens | LTQ Orbitrap; instrument model: LTQ-Orbitrap | Vaudel et al. (2012) | Lennart Martens | | 2012-08-13 |
| PXD000014 | human 293 cells PEDF LC-MS/MS | PRIDE | Homo sapiens | LTQ Orbitrap | Jerebtsova et al. (2012) | Yuri Obukhov | | 2012-08-08 |
| PXD000005 | Proteomic screen reveals Fbw7 as a modulator of the NF-kB pathway | PRIDE | Homo sapiens | LTQ Orbitrap Velos | Arabi et al. (2012) | Rui Branca | | 2012-06-29 |
| PXD000001 | TMT spikes | PRIDE | Erwinia carotovora | instrument model: LTQ Orbitrap Velos; LTQ Orbitrap Velos | Gatto & Christoforou (2014) | Laurent Gatto | | 2012-05-11 |
| PXD000002 | Combined personal saliva proteome and microbioproteome | PRIDE | Homo sapiens | linear ion trap | no publication | Attila Csordas | | 2012-05-11 |
| PXD000003 | Human CAP ovarian cancer plasma (Huettenhain et al.) | PeptideAtlas | Homo sapiens | QTRAP 5500 | Hüttenhain et al. (2012) | Ruth Hüttenhain | Ruedi Aebersold | 2012-05-11 |
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