ProteomeXchange Datasets Overview

Below is a listing of publicly accessible ProteomeXchange datasets. You can use the search box or interactive graphics to filter the list.
Top 10 Species
Top 10 Instruments
Need to access individual spectra from a ProteomeXchange dataset?

Search metadata for ProteomeXchange datasets: (e.g. "liver", "musculus", "5600", etc. Not yet possible to search for individual proteins)

x


Dataset Identifier Title Repos Species Instrument Publication LabHead Announce Date Keywords
PXD030651 MS analysis of phosphopeptides enriched from the lumbar spinal cord of SOD1G93A mice at 20weeks. jPOST Mus musculus Q Exactive Asano et al. (2022) Fumiaki Tanaka 2022-05-18 SOD1G93A. phosphopeptide,
PXD033980 Effects of extracellular products of Vibrio mimicus on immune response and disease resistance of crucial carp iProX Vibrio mimicus Orbitrap Fusion Lumos Dataset with its publication pending Xiaofeng Shan 2022-05-18 Vibrio mimicus, Extracellular products, LC-MS/MS, Immune protection, Cruaial Carps.,
PXD028718 Proteomic analysis of NFIX over-expression in C2C12 myotubes PRIDE Mus musculus Orbitrap Exploris 480 Dataset with its publication pending Benjamin Parker 2022-05-18 C2C12, myoblasts, myotubes, NFIX,
PXD033786 16 mouse gut microbiota collected from 8 mice at two time points shortly after weaning MassIVE mouse gut microbiome Q Exactive HF-X no publication Hao, Chunlin, Henry Lam, Patrick Lee 2022-05-18 mouse gut microbiome, metaproteomics, metaSpectraST,
PXD033948 Sample Dataset of MSRefine software iProX Homo sapiens Q Exactive HF-X; timsTOF Pro Dataset with its publication pending Chao Liu 2022-05-17 Sample dataset, Thermo Orbitrap, timsTOF Pro,
PXD031747 Zhang_DDAnoDE_BioID_noDE_P127_6600 MassIVE Homo sapiens TripleTOF 6600 no publication Anne-Claude Gingras 2022-05-17 KRAS, BioID, Data-dependent acquisition, Dynamic Exclusion,
PXD031746 ShenZhang_DDAnoDE_BioID_P127_6600 MassIVE Homo sapiens TripleTOF 6600 no publication Anne-Claude Gingras 2022-05-17 KRAS, BioID, Data-dependent acquisition,
PXD031745 Zhang_DDAnoDE_APMS_noDE_P63_6600 MassIVE Homo sapiens TripleTOF 6600 no publication Anne-Claude Gingras 2022-05-17 MEPCE, EIF4A2, AP-MS, Data-dependent acquisition, Dynamic exclusion,
PXD031743 ShenZhang_DDAnoDE_APMS_P63_6600 MassIVE Homo sapiens TripleTOF 6600 no publication Anne-Claude Gingras 2022-05-17 MEPCE, EIF4A2, AP-MS, Data-dependent acquisition,
PXD031740 ShenZhang_DDAnoDE_Ecoli_P63_6600 MassIVE Escherichia coli TripleTOF 6600 no publication Anne-Claude Gingras 2022-05-17 Escherichia coli, Data-dependent acquisition, Dynamic Exclusion,
Page Size

If you have a question or comment about ProteomeXchange, please contact us!
to receive all new ProteomeXchange dataset release announcements!